Additional file 3: of Analysis of the canid Y-chromosome phylogeny using short-read sequencing data reveals the presence of distinct haplogroups among Neolithic European dogs

Figure S1. Structure and annotation of the dog Y-chromosome (KP081776.1) amplicon region (chrY:1,200,000–2,440,580) A self-alignment of the dog Y-chromosome amplicon sequence for visualization of palindrome repeat sequences is presented (A). The three repeat families are color coded in purple, pink, and blue. The annotated sequence with amplicon genes (black) is represented as a UCSC browser track (B). Individual palindrome arms are numbered while palindrome spacers are lettered. (PDF 2240 kb