This is the "pruned" six-gene dataset ("pruned" from Schoch et al. 2009, with Laboulbeniomycetes sequences added) used for Maximum Likelihood inference
Maximum likelihood (ML) trees for each sequence capture gene used for species tree analyses. ML anal...
This is the R script used to prune alleles from the sequence data sets and the corresponding tips in...
<p>Maximum likelihood phylogeny and bootstrap support values based on 1000 pseudoreplicates of the a...
This is the resulting pruned-6-gene_phylogeny_ML.result file from the Maximum Likelihood analysis of...
This is the input XML file (generated in BEAUti) for Bayesian inference of the "pruned" six-gene dat...
Resulting 6-gene_phylogeny_ML.result file from the Maximum Likelihood analysis of the six-gene datas...
All gene trees (best and bootstrapped) inferred in RAxML for all the filtered datasets. Contents in...
Estimated gene trees for simulated dataset with high ILS. For each set of gene trees (200 genes), on...
This is the three-gene input dataset (NEXUS format) used for Maximum Likelihood analysis and Bayesia...
Estimated gene trees for simulated dataset with low ILS. For each set of gene trees (200 genes), one...
Zip file of reduced gene datasets (corresponding to Lissamphibia question). Included are 8 files cor...
Maximum likelihood analysis of the four-marker data set (gene-partitioned), showing bootstrap suppor...
This folder includes simulated and real data used in validating CNETML, a new maximum likelihood met...
This folder includes simulated and real data used in validating CNETML, a new maximum likelihood met...
Circled genes are from mobile integrons. IntI proteins were aligned in MAFFT [58] and used to genera...
Maximum likelihood (ML) trees for each sequence capture gene used for species tree analyses. ML anal...
This is the R script used to prune alleles from the sequence data sets and the corresponding tips in...
<p>Maximum likelihood phylogeny and bootstrap support values based on 1000 pseudoreplicates of the a...
This is the resulting pruned-6-gene_phylogeny_ML.result file from the Maximum Likelihood analysis of...
This is the input XML file (generated in BEAUti) for Bayesian inference of the "pruned" six-gene dat...
Resulting 6-gene_phylogeny_ML.result file from the Maximum Likelihood analysis of the six-gene datas...
All gene trees (best and bootstrapped) inferred in RAxML for all the filtered datasets. Contents in...
Estimated gene trees for simulated dataset with high ILS. For each set of gene trees (200 genes), on...
This is the three-gene input dataset (NEXUS format) used for Maximum Likelihood analysis and Bayesia...
Estimated gene trees for simulated dataset with low ILS. For each set of gene trees (200 genes), one...
Zip file of reduced gene datasets (corresponding to Lissamphibia question). Included are 8 files cor...
Maximum likelihood analysis of the four-marker data set (gene-partitioned), showing bootstrap suppor...
This folder includes simulated and real data used in validating CNETML, a new maximum likelihood met...
This folder includes simulated and real data used in validating CNETML, a new maximum likelihood met...
Circled genes are from mobile integrons. IntI proteins were aligned in MAFFT [58] and used to genera...
Maximum likelihood (ML) trees for each sequence capture gene used for species tree analyses. ML anal...
This is the R script used to prune alleles from the sequence data sets and the corresponding tips in...
<p>Maximum likelihood phylogeny and bootstrap support values based on 1000 pseudoreplicates of the a...