Add to ORKGWGS reads of Chinese Spring (ENA: PRJNA392179) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q>=30) homozygous; Het = high quality (Q>=30) heterozygous; LowQualHom = low quality (Q<30) homozygous; LowQualHet = low qua...
Alignment of reads for the WGS of the Jersey Kale specimen against the B. oleracea reference genome ...
The post-human genome sequencing project era has seen an influx of genome sequencing projects establ...
The files correspond to data and results referenced in research article titled "Chromosome-scale ass...
WGS reads of Xiaoyan-54 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against th...
WGS reads of RAC-875 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the I...
WGS reads of Excalibur (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the...
WGS reads of Baxter (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IW...
WGS reads of Kukri (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWG...
International audienceUntil recently, achieving a reference-quality genome sequence for bread wheat ...
VCF file of 2,799,166 single nucleotide polymorphism (SNP) markers positioned onto the Chinese Sprin...
Relationship between the number of SNPs per chromosome and chromosome sizes when (a) barley genome, ...
Numbers of data points per chromosome after imputation with barley genome, Chinese Spring survey seq...
The “Genes” track shows the high confidence genes according to the RefSeq annotation v 1.0. The yell...
The TaBW280K SNP array (Rimbert et al., PLoS ONE 2018) was used to genotype 430 Single Seed Descent ...
Numbers of SNPs called after five (3 runs of the library 1 and 2 runs of the library 2), six (4 runs...
Alignment of reads for the WGS of the Jersey Kale specimen against the B. oleracea reference genome ...
The post-human genome sequencing project era has seen an influx of genome sequencing projects establ...
The files correspond to data and results referenced in research article titled "Chromosome-scale ass...
WGS reads of Xiaoyan-54 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against th...
WGS reads of RAC-875 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the I...
WGS reads of Excalibur (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the...
WGS reads of Baxter (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IW...
WGS reads of Kukri (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWG...
International audienceUntil recently, achieving a reference-quality genome sequence for bread wheat ...
VCF file of 2,799,166 single nucleotide polymorphism (SNP) markers positioned onto the Chinese Sprin...
Relationship between the number of SNPs per chromosome and chromosome sizes when (a) barley genome, ...
Numbers of data points per chromosome after imputation with barley genome, Chinese Spring survey seq...
The “Genes” track shows the high confidence genes according to the RefSeq annotation v 1.0. The yell...
The TaBW280K SNP array (Rimbert et al., PLoS ONE 2018) was used to genotype 430 Single Seed Descent ...
Numbers of SNPs called after five (3 runs of the library 1 and 2 runs of the library 2), six (4 runs...
Alignment of reads for the WGS of the Jersey Kale specimen against the B. oleracea reference genome ...
The post-human genome sequencing project era has seen an influx of genome sequencing projects establ...
The files correspond to data and results referenced in research article titled "Chromosome-scale ass...