WGS reads of Kukri (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q>=30) homozygous; Het = high quality (Q>=30) heterozygous; LowQualHom = low quality (Q<30) homozyg...
<p>The experimentally obtained rice reads (60, 30, and 15 millions) were mixed with the simulated 75...
BAM file of read alignments used to call variants in the Nitzschia sp. Nitz4 genome. The BAM file wa...
Bread wheat (Triticum aestivum L.) is the most important staple food crop for 35% of the world's...
WGS reads of RAC-875 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the I...
WGS reads of Excalibur (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the...
WGS reads of Chinese Spring (ENA: PRJNA392179) were aligned against the IWGSC <i>Triticum aestivum</...
WGS reads of Baxter (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IW...
WGS reads of Xiaoyan-54 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against th...
International audienceUntil recently, achieving a reference-quality genome sequence for bread wheat ...
Alignment of reads for the WGS of the Jersey Kale specimen against the B. oleracea reference genome ...
<p>(A) Comparison of genotype calling consistency among the five read mapping strategies for all chr...
Relationship between the number of SNPs per chromosome and chromosome sizes when (a) barley genome, ...
De novo Genome assembly and k-mer frequency counting are two of the classical prob- lems of Bioinfo...
The 1000 Genomes Project produced more than 100 trillion basepairs of short read sequence from more ...
The files correspond to data and results referenced in research article titled "Chromosome-scale ass...
<p>The experimentally obtained rice reads (60, 30, and 15 millions) were mixed with the simulated 75...
BAM file of read alignments used to call variants in the Nitzschia sp. Nitz4 genome. The BAM file wa...
Bread wheat (Triticum aestivum L.) is the most important staple food crop for 35% of the world's...
WGS reads of RAC-875 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the I...
WGS reads of Excalibur (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the...
WGS reads of Chinese Spring (ENA: PRJNA392179) were aligned against the IWGSC <i>Triticum aestivum</...
WGS reads of Baxter (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IW...
WGS reads of Xiaoyan-54 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against th...
International audienceUntil recently, achieving a reference-quality genome sequence for bread wheat ...
Alignment of reads for the WGS of the Jersey Kale specimen against the B. oleracea reference genome ...
<p>(A) Comparison of genotype calling consistency among the five read mapping strategies for all chr...
Relationship between the number of SNPs per chromosome and chromosome sizes when (a) barley genome, ...
De novo Genome assembly and k-mer frequency counting are two of the classical prob- lems of Bioinfo...
The 1000 Genomes Project produced more than 100 trillion basepairs of short read sequence from more ...
The files correspond to data and results referenced in research article titled "Chromosome-scale ass...
<p>The experimentally obtained rice reads (60, 30, and 15 millions) were mixed with the simulated 75...
BAM file of read alignments used to call variants in the Nitzschia sp. Nitz4 genome. The BAM file wa...
Bread wheat (Triticum aestivum L.) is the most important staple food crop for 35% of the world's...