Figure S5. Linkage disequilibrium (LD) decay plot. The vertical axis indicates the mean Estimated R-squared (r2), and the horizontal axis indicates the distance in kb at which LD decays. (PDF 220 kb
Figure S3: Individual dog and wolf haplogroup topologies from RAxML tree A. HG1â3, B. HG6 C. HG23-...
Linkage disequilibrium plot (r2) of the DGAT region in the Danish Holstein breed. (PNG 357 kb
Reconstructed pedigrees of some monitored packs in the study area, detected by camera trapping and n...
Figure S6. Graphical representation, for each chromosome of each analysed Czechoslovakian Wolfdog, o...
Figure S4. Comparison between the individual frequency of ROHs (FROH), calculated in SVS as the prop...
Figure S7a. BGC alpha parameter outlier SNPs. Values lower than 0 indicate excess of wolf alleles, v...
Figure S2. Genetic variability indexes computed in SVS using the 126k SNP dataset. a Mean values of ...
Figure S3. PC1 vs. PC2 results from an exploratory principal component analysis (PCA) computed in SV...
Figure S1. FST heat plot matrix of the genetic distances among groups computed from the 126k dataset...
Table S1a. Wolf-excess genes surrounding outlier wolf-like SNPs (OWS) from PCAdmix. Table S1b. Enric...
Manhattan plot and linkage disequilibrium (LD) map in each 1-Mb window discussed in our study. (PDF ...
Histogram of mean Fst scores calculated in 500kb windows genome-wide between dogs and wolves. Histog...
Plots displaying aCGH probe intensity correlations with in silico copy number estimates. (PDF 1916 k...
Figure S2. Coyote read depth and MQ0 ratio by position An exponentially weighted moving averages (EW...
PCA plot of samples included in this study. PCA of genome-wide polymorphism data from 67 dogs and 7 ...
Figure S3: Individual dog and wolf haplogroup topologies from RAxML tree A. HG1â3, B. HG6 C. HG23-...
Linkage disequilibrium plot (r2) of the DGAT region in the Danish Holstein breed. (PNG 357 kb
Reconstructed pedigrees of some monitored packs in the study area, detected by camera trapping and n...
Figure S6. Graphical representation, for each chromosome of each analysed Czechoslovakian Wolfdog, o...
Figure S4. Comparison between the individual frequency of ROHs (FROH), calculated in SVS as the prop...
Figure S7a. BGC alpha parameter outlier SNPs. Values lower than 0 indicate excess of wolf alleles, v...
Figure S2. Genetic variability indexes computed in SVS using the 126k SNP dataset. a Mean values of ...
Figure S3. PC1 vs. PC2 results from an exploratory principal component analysis (PCA) computed in SV...
Figure S1. FST heat plot matrix of the genetic distances among groups computed from the 126k dataset...
Table S1a. Wolf-excess genes surrounding outlier wolf-like SNPs (OWS) from PCAdmix. Table S1b. Enric...
Manhattan plot and linkage disequilibrium (LD) map in each 1-Mb window discussed in our study. (PDF ...
Histogram of mean Fst scores calculated in 500kb windows genome-wide between dogs and wolves. Histog...
Plots displaying aCGH probe intensity correlations with in silico copy number estimates. (PDF 1916 k...
Figure S2. Coyote read depth and MQ0 ratio by position An exponentially weighted moving averages (EW...
PCA plot of samples included in this study. PCA of genome-wide polymorphism data from 67 dogs and 7 ...
Figure S3: Individual dog and wolf haplogroup topologies from RAxML tree A. HG1â3, B. HG6 C. HG23-...
Linkage disequilibrium plot (r2) of the DGAT region in the Danish Holstein breed. (PNG 357 kb
Reconstructed pedigrees of some monitored packs in the study area, detected by camera trapping and n...