Provides an aggregate summary of RNA extraction and quality check for all samples. Mammary tissue was collected on days 14, 10, 6 and 2 before (â) parturition and on day 1 after (+) parturition from three 2nd parity sows. Extraction of RNA and quality evaluation was performed following protocols described by Tramontana et al. (2008) [15]. (XLSX 10Â kb
Distribution of gene expression level (FPKM) for the depleted and non-depleted RNA samples from non-...
The expression profile of novel lncRNAs in the dry and lactation periods. (XLSX 980 kb
The expression file of annotated DELs in the dry and lactation periods. (XLSX 224 kb
Provides an aggregate summary of RNA sequencing and alignment for all the samples. mRNA libraries we...
Provides the complete list of differentially expressed genes (DEG) resulting from differential expre...
Provides complete list of upstream regulator resulting from Ingenuity Pathway Analysis (IPA) analysi...
Additional file 2: Table S2. Summary of reads mapping to RNA regions of the swine genome. Number of ...
RNA-seq data for genes more highly expressed during late pregnancy. Table S3: RNA-seq data for genes...
Abstract Background Colostrum and milk are essential sources of antibodies and nutrients for the neo...
Correlation plot of gene expression level (in log10 FPKM) between depleted and non-depleted RNA samp...
Supplementary text detailing RT-qPCR validation of the RNA-seq data. Table S4. Candidate genes measu...
The expression file of novel DELs in the dry and lactation periods. (XLSX 230 kb
Lists of differentially expressed genes comparing pathogen-challenged and non-challenged udder quart...
The expression profile of annotated lncRNAs in the dry and lactation periods. (XLSX 1732 kb
Table S1. List of RT-qPCR primers sequences, product length and their annealing temperatures. Table ...
Distribution of gene expression level (FPKM) for the depleted and non-depleted RNA samples from non-...
The expression profile of novel lncRNAs in the dry and lactation periods. (XLSX 980 kb
The expression file of annotated DELs in the dry and lactation periods. (XLSX 224 kb
Provides an aggregate summary of RNA sequencing and alignment for all the samples. mRNA libraries we...
Provides the complete list of differentially expressed genes (DEG) resulting from differential expre...
Provides complete list of upstream regulator resulting from Ingenuity Pathway Analysis (IPA) analysi...
Additional file 2: Table S2. Summary of reads mapping to RNA regions of the swine genome. Number of ...
RNA-seq data for genes more highly expressed during late pregnancy. Table S3: RNA-seq data for genes...
Abstract Background Colostrum and milk are essential sources of antibodies and nutrients for the neo...
Correlation plot of gene expression level (in log10 FPKM) between depleted and non-depleted RNA samp...
Supplementary text detailing RT-qPCR validation of the RNA-seq data. Table S4. Candidate genes measu...
The expression file of novel DELs in the dry and lactation periods. (XLSX 230 kb
Lists of differentially expressed genes comparing pathogen-challenged and non-challenged udder quart...
The expression profile of annotated lncRNAs in the dry and lactation periods. (XLSX 1732 kb
Table S1. List of RT-qPCR primers sequences, product length and their annealing temperatures. Table ...
Distribution of gene expression level (FPKM) for the depleted and non-depleted RNA samples from non-...
The expression profile of novel lncRNAs in the dry and lactation periods. (XLSX 980 kb
The expression file of annotated DELs in the dry and lactation periods. (XLSX 224 kb