Comparison of ClustAGE results with pairwise gene ortholog analysis. (XLSX 54Â kb
Bacterial strain orthology logic array indicating the presence of given orthologs (7194 of them) in ...
Table S1. Bacterial strains with their corresponding accession numbers used in the study. (DOCX 29 k...
Strains used for the comparative analysis. (A) Strains used for the phylogenetic analysis. Character...
Archive containing output files from ClustAGE analysis of accessory genome sequence files found in A...
Archive containing relevant output files from the Spine and AGEnt analyses of the reference genomes....
Abstract Background The non-conserved accessory genome of bacteria can be associated with important ...
Table S5. A list of the 19 gene expression datasets which have more samples than 50 (complementary l...
Table S4. MSE and JI values for whole clustering results as generated by each of the eight methods w...
a Tree inferred by CSI Phylogeny pruning set to 10, contigs from day 1 used as reference. PDF. b Tre...
Table S14. GO terms of some of the results of applying clust to multiple datasets simultaneously. (X...
Table S2. A list of the 100 gene expression datasets analyzed in this study. (XLSX 18 kb
Table S13. Numbers of clusters generated by applying each of the eight clustering methods to multipl...
a Tree inferred by NDtree, Z-score 1.96, Neighbor Joining tree, E. coli NC_017641 used as reference....
Comparative genomic analysis of Clostridium sp. CADE, C. algidicarnis CALG, and C. perfringens CPER ...
Table S6. MSE and JI values for all individual clusters generated by each of the eight methods when ...
Bacterial strain orthology logic array indicating the presence of given orthologs (7194 of them) in ...
Table S1. Bacterial strains with their corresponding accession numbers used in the study. (DOCX 29 k...
Strains used for the comparative analysis. (A) Strains used for the phylogenetic analysis. Character...
Archive containing output files from ClustAGE analysis of accessory genome sequence files found in A...
Archive containing relevant output files from the Spine and AGEnt analyses of the reference genomes....
Abstract Background The non-conserved accessory genome of bacteria can be associated with important ...
Table S5. A list of the 19 gene expression datasets which have more samples than 50 (complementary l...
Table S4. MSE and JI values for whole clustering results as generated by each of the eight methods w...
a Tree inferred by CSI Phylogeny pruning set to 10, contigs from day 1 used as reference. PDF. b Tre...
Table S14. GO terms of some of the results of applying clust to multiple datasets simultaneously. (X...
Table S2. A list of the 100 gene expression datasets analyzed in this study. (XLSX 18 kb
Table S13. Numbers of clusters generated by applying each of the eight clustering methods to multipl...
a Tree inferred by NDtree, Z-score 1.96, Neighbor Joining tree, E. coli NC_017641 used as reference....
Comparative genomic analysis of Clostridium sp. CADE, C. algidicarnis CALG, and C. perfringens CPER ...
Table S6. MSE and JI values for all individual clusters generated by each of the eight methods when ...
Bacterial strain orthology logic array indicating the presence of given orthologs (7194 of them) in ...
Table S1. Bacterial strains with their corresponding accession numbers used in the study. (DOCX 29 k...
Strains used for the comparative analysis. (A) Strains used for the phylogenetic analysis. Character...
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