Additional file 5: Table S1. Evolutionary-intolerant fixed variants (AF > 90%). Table S2. DAVID gene-set enrichment analysis for evolutionary-intolerant fixed variation. Table S3. Evolutionary-intolerant variants predicted to have a severe impact on the protein (PROVEAN score <= -5). Table S4. Fixed evolutionary-intolerant variants in selective sweep regions
Additional file 3: Table S2. Detailed information on SNPs associated with feed intake and efficiency...
Additional file 1: Table S1. Descriptive statistics of all traits studied in Horro and Jarso chicken...
Additional file 1: Table S1. . SNPs with a genome-wide significance level pgenome wide < 0.05 and th...
Additional file 1: Table S1. Statistics per breed. Table S2. Candidate mutations in regions of missi...
Additional file 6: Table S1. High-frequency deleterious variation in the WA line. Table S2. High-fre...
Additional file 3: Table S1. Haplotypes exhibiting missing or depleted homozygosity in the WA line. ...
Background: Deleterious genetic variation can increase in frequency as a result of mutations, geneti...
Table S3. Differences in measures of homozygosity between individuals among 9 sub-populations in thr...
Additional file 8: Table S3. Results of the whole-genome sequence analysis: list of genes showing SN...
Additional file 6: Tables S6 and S7. List of genes located in the candidate genomic regions for the ...
Additional file 7: Figures S4 and S5. Pathway analysis results using the IPA software for the Jarso ...
The chicken major histocompatibility complex (MHC) on chromosome 16 is the most polymorphic region a...
Additional file 1: Table S1. Line, animal ID, phenotype, sex and mean sequence coverage for slow fea...
Additional file 10: Tables S9 and S10. List of selected candidate genes for immune, disease and prod...
The chicken major histocompatibility complex (MHC) on chromosome 16 is the most polymorphic region a...
Additional file 3: Table S2. Detailed information on SNPs associated with feed intake and efficiency...
Additional file 1: Table S1. Descriptive statistics of all traits studied in Horro and Jarso chicken...
Additional file 1: Table S1. . SNPs with a genome-wide significance level pgenome wide < 0.05 and th...
Additional file 1: Table S1. Statistics per breed. Table S2. Candidate mutations in regions of missi...
Additional file 6: Table S1. High-frequency deleterious variation in the WA line. Table S2. High-fre...
Additional file 3: Table S1. Haplotypes exhibiting missing or depleted homozygosity in the WA line. ...
Background: Deleterious genetic variation can increase in frequency as a result of mutations, geneti...
Table S3. Differences in measures of homozygosity between individuals among 9 sub-populations in thr...
Additional file 8: Table S3. Results of the whole-genome sequence analysis: list of genes showing SN...
Additional file 6: Tables S6 and S7. List of genes located in the candidate genomic regions for the ...
Additional file 7: Figures S4 and S5. Pathway analysis results using the IPA software for the Jarso ...
The chicken major histocompatibility complex (MHC) on chromosome 16 is the most polymorphic region a...
Additional file 1: Table S1. Line, animal ID, phenotype, sex and mean sequence coverage for slow fea...
Additional file 10: Tables S9 and S10. List of selected candidate genes for immune, disease and prod...
The chicken major histocompatibility complex (MHC) on chromosome 16 is the most polymorphic region a...
Additional file 3: Table S2. Detailed information on SNPs associated with feed intake and efficiency...
Additional file 1: Table S1. Descriptive statistics of all traits studied in Horro and Jarso chicken...
Additional file 1: Table S1. . SNPs with a genome-wide significance level pgenome wide < 0.05 and th...