MOESM1 of A survey of functional genomic variation in domesticated chickens
- Martijn Derks (3289113)
- Hendrik-Jan Megens (116285)
- Mirte Bosse (116283)
- Jeroen Visscher (3583910)
- Katrijn Peeters (3316947)
- Marco Bink (3578189)
- Addie Vereijken (42571)
- Christian Gross (429429)
- Dick Ridder (5107142)
- Marcel Reinders (66822)
- Martien Groenen (3191614)
Publication date
April 2018
DOIAbstract
Additional file 1: Table S1. Statistics per breed. Table S2. Candidate mutations in regions of missing homozygosity. Table S3. Single nucleotide variants (SNV) and indels called. Table S4. Summary of identified variants for each line. Table S5. Call rate and TS/TV for all variants after filtering. Table S6. Functional annotation of variants (VEP). Table S7. Final list of deleterious variants identified in nine different classes. Table S8. Fertility phenotypes for three CXC matings that carry the OFD1 (Y19C) missense mutation
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