Figure S6. Sequencing coverage comparison of detected WES and RNA-seq indels in SU2C cohort. (PDF 97Â kb
Gene detection logistic regression model. See model details in Methods . Abbreviations: M expected n...
Supplemental Table 1: Summary of cv. M82 vs. S. pennellii SNP/indel distribution for RNAseq and RESC...
Figure S4. Levey-Jennings plots for bacterial genera over the course of 16 sequencing runs (x-axis, ...
Figure S5. RNA-seq coverage for annotated exons and introns in subject 1,115,156 from SU2C cohort. (...
Figure S2. Benchmarking of transIndel for mid-sized indels against existing indel detection tools us...
Figure S7. An example of FOXA1 deletion detected by RNA-seq but missed by WES due to low coverage in...
Figure S4. Examples of detected 214 bp deletion in 3’UTR of ATAD5 and 30 bp insertion in exon 15 of ...
Figure S3. TransIndel detects a 3433Â bp deletion in AR from human prostate cancer sample. (PDF 330Â...
Figure S2. Indel spectrum determined by TIDE of the on-target sites compared with indel frequencies ...
Figures S1-S14. Complex indels detected in samples 1â14 and orthogonal validation. (PDF 1637 kb
Table S1. Parameter Settings used for alignment, data pre-processing and variant calling. Table S2. ...
Additional file 2: Table S1. Coverage uniformity across gene body and gene number detected by SHERRY...
Putative complex indels curated from GIAB high-confidence variant calls (n = 160). Table S2. Closely...
Figure S3. Indel spectrum determined by TIDE of the off-target sites compared with indel frequencies...
Supplementary materials for Performance evaluation of indel calling tools using real short-read data...
Gene detection logistic regression model. See model details in Methods . Abbreviations: M expected n...
Supplemental Table 1: Summary of cv. M82 vs. S. pennellii SNP/indel distribution for RNAseq and RESC...
Figure S4. Levey-Jennings plots for bacterial genera over the course of 16 sequencing runs (x-axis, ...
Figure S5. RNA-seq coverage for annotated exons and introns in subject 1,115,156 from SU2C cohort. (...
Figure S2. Benchmarking of transIndel for mid-sized indels against existing indel detection tools us...
Figure S7. An example of FOXA1 deletion detected by RNA-seq but missed by WES due to low coverage in...
Figure S4. Examples of detected 214 bp deletion in 3’UTR of ATAD5 and 30 bp insertion in exon 15 of ...
Figure S3. TransIndel detects a 3433Â bp deletion in AR from human prostate cancer sample. (PDF 330Â...
Figure S2. Indel spectrum determined by TIDE of the on-target sites compared with indel frequencies ...
Figures S1-S14. Complex indels detected in samples 1â14 and orthogonal validation. (PDF 1637 kb
Table S1. Parameter Settings used for alignment, data pre-processing and variant calling. Table S2. ...
Additional file 2: Table S1. Coverage uniformity across gene body and gene number detected by SHERRY...
Putative complex indels curated from GIAB high-confidence variant calls (n = 160). Table S2. Closely...
Figure S3. Indel spectrum determined by TIDE of the off-target sites compared with indel frequencies...
Supplementary materials for Performance evaluation of indel calling tools using real short-read data...
Gene detection logistic regression model. See model details in Methods . Abbreviations: M expected n...
Supplemental Table 1: Summary of cv. M82 vs. S. pennellii SNP/indel distribution for RNAseq and RESC...
Figure S4. Levey-Jennings plots for bacterial genera over the course of 16 sequencing runs (x-axis, ...
DOI
Add to ORKG