Figure S3. Taxonomic shifts associated with synbiotic supplementation. A. LEfSe plot of bacterial genera with an increased relative abundance during pre-supplementation. LEfSe did not detect an enrichment of bacterial taxa during mid-supplementation. B. Examination of the relative abundance of probiotic strains from pre-supplementation to 4-months post-supplementation revealed no significant changes. Statistical significance was tested using Dunnâs multiple comparisons test. (PDF 406 kb
Linear discriminant analysis (LDA) scores for differentially abundant bacterial taxa due to pet expo...
Figure S5. Correlations between continuous phenotypic parameters and species profile in the entire c...
Comparison of microbiota profiles in NEC and control infants subgrouped by diet. Observed species (o...
Table S3. Unweighted and weighted UniFrac PERMANOVA p-values of samples from untreated (15mo), pre-,...
Figure S5. Lactobacillus genera are quantitatively increased in the gut of synbiotic-supplemented ju...
Table S5. Unweighted and weighted UniFrac PERMANOVA p-values of samples from juveniles before and du...
Table S1. Sample/count summary. Provided are sequencing read counts (minimum, median, max, and mean)...
Figure S1. Loose stools and synbiotic supplementation was not associated with significant weight los...
Figure S4. Majority of species-level bacterial DNA from probiotics is undetectable in the gut of sup...
Figure S8. Relative abundance of LEfSe-identified enriched KEGG pathways in the synbiotic supplement...
Figure S1. Significant differences between groups defined by birth mode and supplement treatment on ...
Additional file 1: Supplemental Figure 1. Overall longitudinal microbiome composition. (A) Compositi...
Heatmap of bacterial abundance in all study specimens. Each vertical line represents the bacterial c...
Logistic mixed model regression analysis for examining the effect of time from birth on bacterial ge...
Table S1. Temporal changes in alpha-diversity. Table S2. Temporal changes in bacterial phyla. Table ...
Linear discriminant analysis (LDA) scores for differentially abundant bacterial taxa due to pet expo...
Figure S5. Correlations between continuous phenotypic parameters and species profile in the entire c...
Comparison of microbiota profiles in NEC and control infants subgrouped by diet. Observed species (o...
Table S3. Unweighted and weighted UniFrac PERMANOVA p-values of samples from untreated (15mo), pre-,...
Figure S5. Lactobacillus genera are quantitatively increased in the gut of synbiotic-supplemented ju...
Table S5. Unweighted and weighted UniFrac PERMANOVA p-values of samples from juveniles before and du...
Table S1. Sample/count summary. Provided are sequencing read counts (minimum, median, max, and mean)...
Figure S1. Loose stools and synbiotic supplementation was not associated with significant weight los...
Figure S4. Majority of species-level bacterial DNA from probiotics is undetectable in the gut of sup...
Figure S8. Relative abundance of LEfSe-identified enriched KEGG pathways in the synbiotic supplement...
Figure S1. Significant differences between groups defined by birth mode and supplement treatment on ...
Additional file 1: Supplemental Figure 1. Overall longitudinal microbiome composition. (A) Compositi...
Heatmap of bacterial abundance in all study specimens. Each vertical line represents the bacterial c...
Logistic mixed model regression analysis for examining the effect of time from birth on bacterial ge...
Table S1. Temporal changes in alpha-diversity. Table S2. Temporal changes in bacterial phyla. Table ...
Linear discriminant analysis (LDA) scores for differentially abundant bacterial taxa due to pet expo...
Figure S5. Correlations between continuous phenotypic parameters and species profile in the entire c...
Comparison of microbiota profiles in NEC and control infants subgrouped by diet. Observed species (o...