Average intensities of the control channel data from 12 as a function of position-specific GC counts

Each 50-mer probe is partitioned into 5 equal parts of 10 nucleotides, and average intensities are computed as a function of GC counts in each part. Different colors represent different samples. The GC-related variations of intensities behave similarly across the five locations on probes, and we thus see that the GC effect is not position specific.<p><b>Copyright information:</b></p><p>Taken from "Model-based analysis of two-color arrays (MA2C)"</p><p>http://genomebiology.com/2007/8/8/R178</p><p>Genome Biology 2007;8(8):R178-R178.</p><p>Published online 29 Aug 2007</p><p>PMCID:PMC2375008.</p><p>