<p>(<b>A</b>) Schematic representation of the location and size of the amplified region obtained during the RT-PCR experiments. (<b>B</b>) PCR products from RT-PCR experiments using genomic DNA and mRNA as templates obtained from wild-type UMAF0158 and processed after 48 h of incubation at 22°C on liquid minimal medium PMS. The primer pairs used is detailed in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0036709#pone.0036709.s006" target="_blank">Table S2</a>. (<b>C</b>) Northern blot analysis of total RNA obtained from wild-type UMAF0158 and mutants in <i>gacA</i> and <i>mgoA</i> genes, using a DNA fragment between <i>mboC</i> and <i>mboD</i> genes as probes (shown in red in panel A). Lane M, ssRNA ladder; lane 1, ...
<p>PCR with different primer combinations on cDNA generated by reverse transcription of RNA isolated...
<p>(A–B) Autoradiograms of primer extension analysis of <i>msrB</i> mRNA are shown (for details, see...
<p>Genomic DNA-free total RNA from wild-type <i>E</i>. <i>chaffeensis</i> (lane 1) and clonal mutant...
<p>Confirmation that the <i>pvcA-D</i> gene cluster constitutes an operon was accomplished through a...
<p>RNA was extracted from 72 h-infected L929 fibroblasts and RT-PCR with primers designed to amplify...
<p>(<b>A</b>) Nucleotide sequence of the terminal region of <i>mbo</i> operon. The 3′-end of <i>mboF...
<p>(A) Sequencing data of amplified regions. Numbers on upper right corner indicate the highest cove...
<p>The non-coding region (603 bp), which contains the promoter sequences of the <i>mbo</i> operon. T...
<p>(<b>A</b>) The operon structure of Ms6508–Ms6509–Ms6510. Primers were designed for assays and ind...
<p>Primers spanning the intergenic regions, used for RT-PCR to test the organization of <i>pmp</i> g...
<p>A, Organization of the <i>amn</i> genes and schematic representation of the location and size of ...
<p>A) RT-PCR reactions were performed with 50 ng of RNA extracted from an overnight TGY culture of t...
<p>The flanking ORFs are shown in red. The sizes of each ORF, the GC content (%), the identity with ...
<p><b>a)</b> Identification of the operon transcriptional start site in the chromatogram of the nucl...
RNA-Seq coverage maps of complex operon/regulon including the TSSs in green and TTSs in red. Size of...
<p>PCR with different primer combinations on cDNA generated by reverse transcription of RNA isolated...
<p>(A–B) Autoradiograms of primer extension analysis of <i>msrB</i> mRNA are shown (for details, see...
<p>Genomic DNA-free total RNA from wild-type <i>E</i>. <i>chaffeensis</i> (lane 1) and clonal mutant...
<p>Confirmation that the <i>pvcA-D</i> gene cluster constitutes an operon was accomplished through a...
<p>RNA was extracted from 72 h-infected L929 fibroblasts and RT-PCR with primers designed to amplify...
<p>(<b>A</b>) Nucleotide sequence of the terminal region of <i>mbo</i> operon. The 3′-end of <i>mboF...
<p>(A) Sequencing data of amplified regions. Numbers on upper right corner indicate the highest cove...
<p>The non-coding region (603 bp), which contains the promoter sequences of the <i>mbo</i> operon. T...
<p>(<b>A</b>) The operon structure of Ms6508–Ms6509–Ms6510. Primers were designed for assays and ind...
<p>Primers spanning the intergenic regions, used for RT-PCR to test the organization of <i>pmp</i> g...
<p>A, Organization of the <i>amn</i> genes and schematic representation of the location and size of ...
<p>A) RT-PCR reactions were performed with 50 ng of RNA extracted from an overnight TGY culture of t...
<p>The flanking ORFs are shown in red. The sizes of each ORF, the GC content (%), the identity with ...
<p><b>a)</b> Identification of the operon transcriptional start site in the chromatogram of the nucl...
RNA-Seq coverage maps of complex operon/regulon including the TSSs in green and TTSs in red. Size of...
<p>PCR with different primer combinations on cDNA generated by reverse transcription of RNA isolated...
<p>(A–B) Autoradiograms of primer extension analysis of <i>msrB</i> mRNA are shown (for details, see...
<p>Genomic DNA-free total RNA from wild-type <i>E</i>. <i>chaffeensis</i> (lane 1) and clonal mutant...