<p>(A) Venn diagram representing differentially methylated CpGs identified for IDH-mut and MLLr AMLs from amongst the 574,178 CpGs adequately represented (>10× coverage) across all six samples. Most DMCs are unique to either AML subtype, with minimal amount of events occurring at common sites across IDH-mut and MLLr. (B) Horizontal barplot comparing the methylation status of CpG sites at DMCs in IDH-mut AML (top) and MLLr AML (bottom). Magenta depicts >25% hypermethylation relative to NBM, green represents >25% hypomethylation and gray represents no differential methylation. Most DMCs are non-overlapping between the two subtypes of AML and display opposite changes in methylation. However, amongst the smaller set of DMCs that do overlap betw...
<p>(A) Box plots showing DNA methylation levels of <i>suvh2/9</i> hypo-DMRs in the indicated mutants...
<p>(A) A hypothetical IAP LTR locus showing the calculation of the i) the overall CpG methylation of...
<p>(a) Performance of the positional dinucleotide model (see <a href="http://www.plosgenetics.org/ar...
<p>(A) Unsupervised analysis of DNA methylation by ERRBS using hierarchical clustering (distance = 1...
<p>(A) Schematic representation of a CpG island (light green), flanked upstream and downstream by 2 ...
<p>(A) DNA methylation of all AML patients and all NBMs were categorized into 5 groups of methylatio...
<p>The bars sum up the DNA methylation status of all CpG dyads. The map next to the bar represents t...
<p>A: Methylation pattern map. For detailed description see legend <a href="http://www.plosgenetics....
<p>(a) Methylation status of single CpGs in one genomic region covering 10% of chromosome 10 (hg18 h...
<p>(A) The methylation level of the CpG sites within <i>GATA4</i> amplicon. (B) The CpG methylation ...
<p>(A) Venn diagrams representing the genomic overlap of DMRs identified in each mutant background. ...
(A) PsC vs. Controls (B) PsA vs. Controls (C) PsA vs. PsC. Data is plotted in bins of 0.1 (10%) chan...
<p>(A) A breakdown of the IAP LTRs in the 5,233 representative set based on their average CpG methyl...
<p><b>a) Venn diagram showing the overlap of MLH1 5' methylation and 3' methylation status</b>. The ...
<p>(A) All NSCLC histologies DM was classified as negligible, small or moderate based on the absolut...
<p>(A) Box plots showing DNA methylation levels of <i>suvh2/9</i> hypo-DMRs in the indicated mutants...
<p>(A) A hypothetical IAP LTR locus showing the calculation of the i) the overall CpG methylation of...
<p>(a) Performance of the positional dinucleotide model (see <a href="http://www.plosgenetics.org/ar...
<p>(A) Unsupervised analysis of DNA methylation by ERRBS using hierarchical clustering (distance = 1...
<p>(A) Schematic representation of a CpG island (light green), flanked upstream and downstream by 2 ...
<p>(A) DNA methylation of all AML patients and all NBMs were categorized into 5 groups of methylatio...
<p>The bars sum up the DNA methylation status of all CpG dyads. The map next to the bar represents t...
<p>A: Methylation pattern map. For detailed description see legend <a href="http://www.plosgenetics....
<p>(a) Methylation status of single CpGs in one genomic region covering 10% of chromosome 10 (hg18 h...
<p>(A) The methylation level of the CpG sites within <i>GATA4</i> amplicon. (B) The CpG methylation ...
<p>(A) Venn diagrams representing the genomic overlap of DMRs identified in each mutant background. ...
(A) PsC vs. Controls (B) PsA vs. Controls (C) PsA vs. PsC. Data is plotted in bins of 0.1 (10%) chan...
<p>(A) A breakdown of the IAP LTRs in the 5,233 representative set based on their average CpG methyl...
<p><b>a) Venn diagram showing the overlap of MLH1 5' methylation and 3' methylation status</b>. The ...
<p>(A) All NSCLC histologies DM was classified as negligible, small or moderate based on the absolut...
<p>(A) Box plots showing DNA methylation levels of <i>suvh2/9</i> hypo-DMRs in the indicated mutants...
<p>(A) A hypothetical IAP LTR locus showing the calculation of the i) the overall CpG methylation of...
<p>(a) Performance of the positional dinucleotide model (see <a href="http://www.plosgenetics.org/ar...