<p>(A) Taxonomic representation of statistically and biologically consistent differences between cancerous tissue and intestinal lumen. Differences are represented by the color of the most abundant class (Red indicating cancerous tissue, yellow non-significant and green intestinal lumen). The diameter of each circle’s diameter is proportional to the taxon’s abundance. (B) Histogram of the LDA scores for differentially abundant genera. Cladogram was calculated by LEfSe, a metagenome analysis approach which performs the linear discriminant analysis following the Wilcoxon Mann-Whitney test to assess effect size of each differentially abundant taxon or OTU; the cladogram is displayed according to effect size.</p
<p>Box-plots showing the abundances of the taxonomic groups significantly differing across the three...
<p>Genus level analysis differences from A, cecal lumen specimens, and B, cecal mucosal samples from...
A) Unsupervised hierarchical clustering of taxonomical (TAX) and functional (FUNC) features. Clades ...
<p>(A) Taxonomic representation of statistically and biologically consistent differences between hea...
a. Diets within fecal sample type, b. Diets within rumen liquor sample type, c. Fecal and rumen liqu...
Significant (red and green) and non-significant (yellow) discriminant taxonomic nodes are colored. C...
(A) Differences in abundance of taxonomic groups among all three sample. LDA cutoff = 2. Differentia...
<p>All taxa are colored based on the phyla to which they belong and sized based on their relative ab...
<p>(<b>A</b>) relative abundance of five main bacterial phyla as well as unclassified “Others”, whic...
(A) Cladogram representing statistically significant differences in bacterial clades among the three...
<p>All taxa are coloured based on the phyla to which they belong and sized based on their relative a...
For each pathway presented, the top left bar shows the tumor biopsy-associated taxa that attenuate t...
<p>Taxa with relative abundance ≥ 0.1% present in at least one sample in each location were included...
<p><b>a:</b> Linear Discriminant Analysis Effect Size (LEfSe) cladogram of differentially abundant t...
The color scale of the heatmap shows the abundance of each bacterial taxonomy according to Z score. ...
<p>Box-plots showing the abundances of the taxonomic groups significantly differing across the three...
<p>Genus level analysis differences from A, cecal lumen specimens, and B, cecal mucosal samples from...
A) Unsupervised hierarchical clustering of taxonomical (TAX) and functional (FUNC) features. Clades ...
<p>(A) Taxonomic representation of statistically and biologically consistent differences between hea...
a. Diets within fecal sample type, b. Diets within rumen liquor sample type, c. Fecal and rumen liqu...
Significant (red and green) and non-significant (yellow) discriminant taxonomic nodes are colored. C...
(A) Differences in abundance of taxonomic groups among all three sample. LDA cutoff = 2. Differentia...
<p>All taxa are colored based on the phyla to which they belong and sized based on their relative ab...
<p>(<b>A</b>) relative abundance of five main bacterial phyla as well as unclassified “Others”, whic...
(A) Cladogram representing statistically significant differences in bacterial clades among the three...
<p>All taxa are coloured based on the phyla to which they belong and sized based on their relative a...
For each pathway presented, the top left bar shows the tumor biopsy-associated taxa that attenuate t...
<p>Taxa with relative abundance ≥ 0.1% present in at least one sample in each location were included...
<p><b>a:</b> Linear Discriminant Analysis Effect Size (LEfSe) cladogram of differentially abundant t...
The color scale of the heatmap shows the abundance of each bacterial taxonomy according to Z score. ...
<p>Box-plots showing the abundances of the taxonomic groups significantly differing across the three...
<p>Genus level analysis differences from A, cecal lumen specimens, and B, cecal mucosal samples from...
A) Unsupervised hierarchical clustering of taxonomical (TAX) and functional (FUNC) features. Clades ...