<p>Among the set of 1307 identified RefSeq RNAs, a subset was selected that contains all RNAs that co-express (at R>0.6) with at least one other RNA in the set of 1307. Cytoscape 2.8 visualization <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0040092#pone.0040092-Shannon1" target="_blank">[31]</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0040092#pone.0040092-Smoot1" target="_blank">[32]</a>. The degree of node interaction (total number of co-expression interactions) is mapped to node size and color (indicated by scale). Biological annotation of genes that are highly represented in identified networks is indicated by letter labels. <b>A</b>: cell cycle; <b>B</b>: co-expression with ESR1; ...
<p>This interaction network for the top 2000 genes which showed a higher expression level in RG was ...
<p>Eleven miRNAs and 174 target genes with an inverse correlation of expression were built into a bi...
<p>The network represents co-expression correlations between the four lncRNAs and significantly diff...
<p><b>A)</b> Super node analysis using the <i>Gene networks</i> tool in <i>VirtualPlant</i>, visuali...
<p>(<b>A</b>) Ingenuity built an integrated cardiogenic scaffold of 363 molecules (i.e., network nod...
<p>The integrative networks were created using Cytoscape software. Each network includes two types o...
<p>Schematic visualization of shared associations between transcription factors (TFs), miRNAs, and d...
Every node represents one gene, and each edge represents the interaction between genes. miRNAs are i...
<p>For each gene, its mean expression level is visualized for non-responders (left) and responders (...
Every node represents one gene, and each edge represents the interaction between genes. mRNAs, miRNA...
<p>Molecular network generated from our microarray <i>Significantly Different Expressed sub-dataset....
MOTIVATION: RNA-seq co-expression analysis is in its infancy and reasonable practices remain poorly ...
<p>Red/orange nodes represent miRNA, with number corresponding to the table; the larger the node the...
<p>The network shows 135 genes (blue nodes), their co-expression (grey lines) and shared protein dom...
<p>miRNA-mRNA interaction networks built by Cytoscape. We identified a total of 108 miRNA-mRNA signi...
<p>This interaction network for the top 2000 genes which showed a higher expression level in RG was ...
<p>Eleven miRNAs and 174 target genes with an inverse correlation of expression were built into a bi...
<p>The network represents co-expression correlations between the four lncRNAs and significantly diff...
<p><b>A)</b> Super node analysis using the <i>Gene networks</i> tool in <i>VirtualPlant</i>, visuali...
<p>(<b>A</b>) Ingenuity built an integrated cardiogenic scaffold of 363 molecules (i.e., network nod...
<p>The integrative networks were created using Cytoscape software. Each network includes two types o...
<p>Schematic visualization of shared associations between transcription factors (TFs), miRNAs, and d...
Every node represents one gene, and each edge represents the interaction between genes. miRNAs are i...
<p>For each gene, its mean expression level is visualized for non-responders (left) and responders (...
Every node represents one gene, and each edge represents the interaction between genes. mRNAs, miRNA...
<p>Molecular network generated from our microarray <i>Significantly Different Expressed sub-dataset....
MOTIVATION: RNA-seq co-expression analysis is in its infancy and reasonable practices remain poorly ...
<p>Red/orange nodes represent miRNA, with number corresponding to the table; the larger the node the...
<p>The network shows 135 genes (blue nodes), their co-expression (grey lines) and shared protein dom...
<p>miRNA-mRNA interaction networks built by Cytoscape. We identified a total of 108 miRNA-mRNA signi...
<p>This interaction network for the top 2000 genes which showed a higher expression level in RG was ...
<p>Eleven miRNAs and 174 target genes with an inverse correlation of expression were built into a bi...
<p>The network represents co-expression correlations between the four lncRNAs and significantly diff...