<p>A) PCA results of matrix generated by sample distances based on classified sequence relative abundance (left) and presence absence (right) for the V regions and FL datasets. B) Similarly to A for OTU relative abundance (left) and presence absence (right). C) PCA results for matrices generated using the weighted (left - phylotype relative abundance based) and unweighted (right - phylotype occurrence based) Unifrac analysis result distances between samples for the V regions and FL datasets.</p
<p>(A) PCoA shows the relationship between the samples. Each data point represents the microbiome id...
. genus level at the time of submission to GenBank were used for machine learning classification exp...
<p>A thicker line represents phylogenetically more similar communities. Phylogenetic diversity (PD) ...
<p>(A) The Firmicutes phylogeny was reconstructed from the OTU representative sequences in the contr...
<p>A) MDS plot based on PCA for 150 taxa with the largest share. Principal component analysis was pe...
<p>(A) Dendrograms based on the sequencing data. (B and C) Principal component analysis (PCA) of clo...
<p>Principal component analysis (PCA) with weighted UniFrac distance analysis of the microbiomes fro...
Principal Component Analysis (PCoA) generated among groups at genus level using Weighted UniFrac met...
<p>A) Weighted PCoA analyzed from rarefied subsets of 25,000 sequences from each sample. B) Unweight...
<p><a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0038550#pone.0038550-Lozupo...
Appreciation of the importance of the microbiome is increasing, as sequencing technology has made it...
(A) Frequency histogram of MRAs of prokaryotic OTUs discovered by the GPC (grey continuous line), of...
<p>EMIRGE-reconstructed rRNA genes were used to construct a phylogenetic tree. From this tree, pairw...
<p>(A) NMDS plot based on unweighted (left) unifrac distance matrix of rarefied OTUs to 10,011 seque...
<p>PCoA is a Multidimensional Scaling Method that allows to explore and to visualize dissimilarities...
<p>(A) PCoA shows the relationship between the samples. Each data point represents the microbiome id...
. genus level at the time of submission to GenBank were used for machine learning classification exp...
<p>A thicker line represents phylogenetically more similar communities. Phylogenetic diversity (PD) ...
<p>(A) The Firmicutes phylogeny was reconstructed from the OTU representative sequences in the contr...
<p>A) MDS plot based on PCA for 150 taxa with the largest share. Principal component analysis was pe...
<p>(A) Dendrograms based on the sequencing data. (B and C) Principal component analysis (PCA) of clo...
<p>Principal component analysis (PCA) with weighted UniFrac distance analysis of the microbiomes fro...
Principal Component Analysis (PCoA) generated among groups at genus level using Weighted UniFrac met...
<p>A) Weighted PCoA analyzed from rarefied subsets of 25,000 sequences from each sample. B) Unweight...
<p><a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0038550#pone.0038550-Lozupo...
Appreciation of the importance of the microbiome is increasing, as sequencing technology has made it...
(A) Frequency histogram of MRAs of prokaryotic OTUs discovered by the GPC (grey continuous line), of...
<p>EMIRGE-reconstructed rRNA genes were used to construct a phylogenetic tree. From this tree, pairw...
<p>(A) NMDS plot based on unweighted (left) unifrac distance matrix of rarefied OTUs to 10,011 seque...
<p>PCoA is a Multidimensional Scaling Method that allows to explore and to visualize dissimilarities...
<p>(A) PCoA shows the relationship between the samples. Each data point represents the microbiome id...
. genus level at the time of submission to GenBank were used for machine learning classification exp...
<p>A thicker line represents phylogenetically more similar communities. Phylogenetic diversity (PD) ...