<p>Slides were spiked with mixture of mixture of 10?8 and 10?5 cfu/ml of <i>E.coli</i> and <i>Lactobacillus</i>. For each pair one replicate was Gram stained while the other was left unstained. After DNA extraction from stained and unstained slides, samples were preamplified using 8F-1492R degenerate bacterial primers for different cycles and analyzed for 16S rDNA copies using species and genera specific quantitative PCR.</p
1<p>Btre = <i>B. trehalosi;</i> Movi = <i>M. ovipneumoniae;</i> Fuso = <i>Fusobacterium</i> sp.; Pre...
<p>The 16S rDNA sequences were obtained from 28 bacterial species (their names and NCBI Gene IDs are...
Repetitive element sequence-based polymerase chain reaction (rep-PCR) enables the generation of DNA ...
*<p>Preamplification was performed at 98°C for 2 minutes, then followed by 10 cycles at 98°C for 30 ...
<p>The plots correspond to amplification from different multispecies DNA mixtures representing diffe...
<p>Four dilutions of six DNA polymerase were tested with primers for 16S rDNA in the presence of 100...
Analysis of polymerase chain reaction (PCR) amplified 16S rDNA fragments from environmental samples ...
A major concern in molecular ecological studies is the lysis efficiency of different bacteria in a c...
The counts (log10 16S rDNA gene copies g-1 of colonic digest) of different bacterial groups measured...
Real-time quantitative PCR assays were developed for the absolute quantification of different groups...
Bacterial DGGE fingerprints based on 16S rRNA gene fragments amplified from total genomic DNA extrac...
<p><i>E</i>. <i>coli</i> DH5α total DNA isolated by the bead beating method (A) and the QIAamp DNA m...
The quantification of the total microbial content in metagenomic samples is critical for investigati...
Bacterial DNA contamination in PCR reagents has been a long standing problem that hampers the adopti...
e-mail: r.bonnet!caramail.com In spite of its shortcoming, analysis of PCR-derived rDNA libraries is...
1<p>Btre = <i>B. trehalosi;</i> Movi = <i>M. ovipneumoniae;</i> Fuso = <i>Fusobacterium</i> sp.; Pre...
<p>The 16S rDNA sequences were obtained from 28 bacterial species (their names and NCBI Gene IDs are...
Repetitive element sequence-based polymerase chain reaction (rep-PCR) enables the generation of DNA ...
*<p>Preamplification was performed at 98°C for 2 minutes, then followed by 10 cycles at 98°C for 30 ...
<p>The plots correspond to amplification from different multispecies DNA mixtures representing diffe...
<p>Four dilutions of six DNA polymerase were tested with primers for 16S rDNA in the presence of 100...
Analysis of polymerase chain reaction (PCR) amplified 16S rDNA fragments from environmental samples ...
A major concern in molecular ecological studies is the lysis efficiency of different bacteria in a c...
The counts (log10 16S rDNA gene copies g-1 of colonic digest) of different bacterial groups measured...
Real-time quantitative PCR assays were developed for the absolute quantification of different groups...
Bacterial DGGE fingerprints based on 16S rRNA gene fragments amplified from total genomic DNA extrac...
<p><i>E</i>. <i>coli</i> DH5α total DNA isolated by the bead beating method (A) and the QIAamp DNA m...
The quantification of the total microbial content in metagenomic samples is critical for investigati...
Bacterial DNA contamination in PCR reagents has been a long standing problem that hampers the adopti...
e-mail: r.bonnet!caramail.com In spite of its shortcoming, analysis of PCR-derived rDNA libraries is...
1<p>Btre = <i>B. trehalosi;</i> Movi = <i>M. ovipneumoniae;</i> Fuso = <i>Fusobacterium</i> sp.; Pre...
<p>The 16S rDNA sequences were obtained from 28 bacterial species (their names and NCBI Gene IDs are...
Repetitive element sequence-based polymerase chain reaction (rep-PCR) enables the generation of DNA ...