<p>Best scoring results for docking of true, foreign and non-binders upon docking to 7 different rigid receptor structures and using flexible receptor docking (using interpolation between the 7 receptor structures). The dotted line marks the best binding energy obtained for the non-binder molecules (corresponds to the limit for distinguishing binders from non-binders). The cross symbols indicate the results of flexible receptor docking and are included for comparison for each docking to a rigid protease receptor (upper 7 rows). The O symbols are present at the bottom of each bar, if the respective best energy docking solution also yields an RMSD<sub>ligand</sub> <2Å.</p
We have developed a new docking method, Pose-Sensitive Inclined (PSI)-DOCK, for flexible ligand dock...
Ligand-protein docking is an optimization problem based on predicting the position of a ligand with ...
P-glycoprotein (P-gp) is involved in the transport of xenobiotic compounds and responsible for the d...
<p>Best scoring results for docking of true, foreign and non-binders to apo (first row), 5 morphing ...
[[abstract]]A molecular docking method designated as ADDock, anchor-dependent molecular docking proc...
<p>HIV-1 protease structure vs. RMSD<sub>ligand</sub> for flexible receptor docking applied to the t...
Finding the orientation of a ligand (small molecule) with the lowest binding energy to the macromole...
A database consisting of 780 ligand-receptor complexes, termed SB2010, has been derived from the Pro...
Molecular docking is the most frequently used computational method for studying the interactions bet...
Item does not contain fulltextWe present Fleksy, a new approach to consider both ligand and receptor...
An extension of the new computational methodology for drug design, the " relaxed complex" method (J....
One main issue in protein-protein docking is to filter or score the putative docked structures. Unli...
The docking of flexible small molecule ligands to large flexible protein targets is addressed in thi...
Copyright © 2015 Igor V. Oferkin et al.This is an open access article distributed under the Creative...
The binding of small molecule ligands to receptor targets is important to numerous biological proces...
We have developed a new docking method, Pose-Sensitive Inclined (PSI)-DOCK, for flexible ligand dock...
Ligand-protein docking is an optimization problem based on predicting the position of a ligand with ...
P-glycoprotein (P-gp) is involved in the transport of xenobiotic compounds and responsible for the d...
<p>Best scoring results for docking of true, foreign and non-binders to apo (first row), 5 morphing ...
[[abstract]]A molecular docking method designated as ADDock, anchor-dependent molecular docking proc...
<p>HIV-1 protease structure vs. RMSD<sub>ligand</sub> for flexible receptor docking applied to the t...
Finding the orientation of a ligand (small molecule) with the lowest binding energy to the macromole...
A database consisting of 780 ligand-receptor complexes, termed SB2010, has been derived from the Pro...
Molecular docking is the most frequently used computational method for studying the interactions bet...
Item does not contain fulltextWe present Fleksy, a new approach to consider both ligand and receptor...
An extension of the new computational methodology for drug design, the " relaxed complex" method (J....
One main issue in protein-protein docking is to filter or score the putative docked structures. Unli...
The docking of flexible small molecule ligands to large flexible protein targets is addressed in thi...
Copyright © 2015 Igor V. Oferkin et al.This is an open access article distributed under the Creative...
The binding of small molecule ligands to receptor targets is important to numerous biological proces...
We have developed a new docking method, Pose-Sensitive Inclined (PSI)-DOCK, for flexible ligand dock...
Ligand-protein docking is an optimization problem based on predicting the position of a ligand with ...
P-glycoprotein (P-gp) is involved in the transport of xenobiotic compounds and responsible for the d...