<p>(A) The probability of the KIF1A head still attached on MT as a function of duration time from the T → D switch. The red, blue, orange, and green lines correspond to the cases of [cargo/strong], [cargo/weak], [stand-alone/strong], and [stand-alone/weak], respectively. The inset is the corresponding results of [cargo/strong] with the three sizes of cargoes, a smaller cargo with friction 2.5×10<sup>−8</sup> (light-green), a middle one with 1.1×10<sup>−8</sup> (red), and a larger one with 0.53×10<sup>−8</sup> (magenta). (B)(C) The binding energy between the KIF1A head and MT as a function of duration time from the T → D switch for case of the strong interaction (B), and for the case of the weak interaction (C). (D) A dissociation trajectory...
<p>(a) The coupling strength matrix. Starting from a random initial condition (not shown), consecuti...
<p>Three different initial probability distributions (A1-3) and three different stimulation-conditio...
<p>Comparison of apparent dissociation constants (K<sub>d</sub>) from ssDNA of A3G and A3F wild-type...
<p>The upper panel shows the re-dissociation probability at each-binding site, while the lower one i...
<p>The time evolutions of the cargo-analog (C-terminus) as a function of time for the cases of [carg...
<p>(A) Schematic representation of kMT-KT interaction, showing various ingredients used in the model...
<p>The upper (lower) panel shows movements for the case of a strong (weak) interaction between KIF1A...
<p>Superposition of extreme configurations obtained from essential dynamics analysis for WT PTCR (A)...
<p><b>A</b>. (upper panel) Representation of the polymer model for TAD D (orange, monomers 1–106), w...
<p>(<i>A</i>) Dissociation time distribution for the EGF end-fixed (<i>black</i>), CR1 end-fixed (<i...
<p>The diagram shows the pathways by which traveling switch components of the rotor (circles) stimul...
<p><i>(A)</i>–<i>(C)</i> Reference simulation: <i>(A)</i> Transition rates of all processes normaliz...
<p>(A) Time-dependent profile for each input for 3 input combinations: , , . (B) Inter-trajectory d...
<p>(<b>A</b>)<b>.</b> Scheme of a dynamic MT (green) elongating from a stable MT seed (red). The dif...
<p>Persistence of HBs between dimers in <i>trans</i> interaction, calculated as percentage of the si...
<p>(a) The coupling strength matrix. Starting from a random initial condition (not shown), consecuti...
<p>Three different initial probability distributions (A1-3) and three different stimulation-conditio...
<p>Comparison of apparent dissociation constants (K<sub>d</sub>) from ssDNA of A3G and A3F wild-type...
<p>The upper panel shows the re-dissociation probability at each-binding site, while the lower one i...
<p>The time evolutions of the cargo-analog (C-terminus) as a function of time for the cases of [carg...
<p>(A) Schematic representation of kMT-KT interaction, showing various ingredients used in the model...
<p>The upper (lower) panel shows movements for the case of a strong (weak) interaction between KIF1A...
<p>Superposition of extreme configurations obtained from essential dynamics analysis for WT PTCR (A)...
<p><b>A</b>. (upper panel) Representation of the polymer model for TAD D (orange, monomers 1–106), w...
<p>(<i>A</i>) Dissociation time distribution for the EGF end-fixed (<i>black</i>), CR1 end-fixed (<i...
<p>The diagram shows the pathways by which traveling switch components of the rotor (circles) stimul...
<p><i>(A)</i>–<i>(C)</i> Reference simulation: <i>(A)</i> Transition rates of all processes normaliz...
<p>(A) Time-dependent profile for each input for 3 input combinations: , , . (B) Inter-trajectory d...
<p>(<b>A</b>)<b>.</b> Scheme of a dynamic MT (green) elongating from a stable MT seed (red). The dif...
<p>Persistence of HBs between dimers in <i>trans</i> interaction, calculated as percentage of the si...
<p>(a) The coupling strength matrix. Starting from a random initial condition (not shown), consecuti...
<p>Three different initial probability distributions (A1-3) and three different stimulation-conditio...
<p>Comparison of apparent dissociation constants (K<sub>d</sub>) from ssDNA of A3G and A3F wild-type...