<p>Maximum parsimony tree using 1,713 bases in the dataset computed with PAUP* and rooted using Dugway (bold) as outgroup. Plasmid type, genomic group (GG), <i>adaA</i> types and the subgroups of the Q154-deletion type are shown next to the tree. Branch lengths correspond to the number of mutations. Animal strains are written in italic. IP: integrated plasmid; WT: wildtype; D<sub>2.1</sub>: deletion 2.1; D<sub>1</sub>: deletion 1. The figure was drawn using APE <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0053440#pone.0053440-Paradis1" target="_blank">[38]</a>.</p
<p>A: Maximum-likelihood sub-tree of <i>Plasmodium</i> species obtained from the alignment analysis ...
<p>The tree is based on concatenated alignments of ten core housekeeping genes: <i>acsA</i>, <i>aroE...
The relative proportions of R7 core genes (open boxes) and strain-variable open reading frames (ORFs...
<p>The phylogenetic tree was drawn using maximum likelihood method employed in MEGA program (Version...
<p>The phylogenetic tree was obtained by Neighbor-Joining analysis. (Black circle), reference strain...
<p>A. In this analysis, the strain N315 was included and used as outgroup. B. Same analysis as in A ...
<p>The evolutionary history was inferred by using the Maximum Likelihood method based on the Hasegaw...
<p><b>Copyright information:</b></p><p>Taken from "Genetic diversity of strains isolated in northeas...
<p><b>Copyright information:</b></p><p>Taken from "Genetic diversity of the obligate intracellular b...
<p>The individual Id's (as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone....
<p>A. Relationship between <i>Gallibacterium anatis</i>, <i>Mannheimia haemolytica</i>, <i>Pasteurel...
<p>The trees were constructed by the distance-based neighbor-joining algorithm using MEGA 5.2.2 soft...
(a) S. Heidelberg concentration from poultry litter microcosms reported in colony forming units (CFU...
<p>Maximum Likelihood tree inferred using RAxML v. 8.2.0 with two concatenated markers, SSU rDNA and...
<p>Branch length values were shown for branches separating different plasmids.</p
<p>A: Maximum-likelihood sub-tree of <i>Plasmodium</i> species obtained from the alignment analysis ...
<p>The tree is based on concatenated alignments of ten core housekeeping genes: <i>acsA</i>, <i>aroE...
The relative proportions of R7 core genes (open boxes) and strain-variable open reading frames (ORFs...
<p>The phylogenetic tree was drawn using maximum likelihood method employed in MEGA program (Version...
<p>The phylogenetic tree was obtained by Neighbor-Joining analysis. (Black circle), reference strain...
<p>A. In this analysis, the strain N315 was included and used as outgroup. B. Same analysis as in A ...
<p>The evolutionary history was inferred by using the Maximum Likelihood method based on the Hasegaw...
<p><b>Copyright information:</b></p><p>Taken from "Genetic diversity of strains isolated in northeas...
<p><b>Copyright information:</b></p><p>Taken from "Genetic diversity of the obligate intracellular b...
<p>The individual Id's (as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone....
<p>A. Relationship between <i>Gallibacterium anatis</i>, <i>Mannheimia haemolytica</i>, <i>Pasteurel...
<p>The trees were constructed by the distance-based neighbor-joining algorithm using MEGA 5.2.2 soft...
(a) S. Heidelberg concentration from poultry litter microcosms reported in colony forming units (CFU...
<p>Maximum Likelihood tree inferred using RAxML v. 8.2.0 with two concatenated markers, SSU rDNA and...
<p>Branch length values were shown for branches separating different plasmids.</p
<p>A: Maximum-likelihood sub-tree of <i>Plasmodium</i> species obtained from the alignment analysis ...
<p>The tree is based on concatenated alignments of ten core housekeeping genes: <i>acsA</i>, <i>aroE...
The relative proportions of R7 core genes (open boxes) and strain-variable open reading frames (ORFs...