<p>Note: np number of parameters, ln<i>L</i> ln[likelihood] value, 2Δ(ln<i>L</i>) twice the difference of ln[likelihood] between the two models compared, vert, mam, OP, and Acan the ancestor branches of the vertebrates, mammals, ostariophysian together with protacanthopterygian fishes, and acanthopterygians fishes, respectively, examined in present study, seabass2 the seabass <i>C3-2</i>, stickleback5 the three-spined stickleback <i>C3-5</i>.The <i>P</i>-values<0.01 are shown in boldface. The human <i>C3</i> sequence was used as reference to mark the positions of the positive sites in all cases. Sites with the <i>P</i>-values<0.05 are shown and those with <i>P</i>-values<0.01 are in boldface.</p
<p>The phylogenetic tree of caspase-3A genes from different species was constructed using the neighb...
We present a method to detect copy number variants (CNVs) that are differentially present between tw...
<p>A likelihood ratio test (LRT) was performed to compare the likelihood scores (lnL) of the two nes...
<p>The Darwin selection pressures were detected by the branch-site models in the ancestral lineages ...
1<p>Number of parameters.</p>2<p>Twice the difference of ln [likelihood] between the two models comp...
<p>−2Δ<i>L</i>, likelihood ratio test to detect positive selection with 1 degree of freedom; Foregro...
<p><sup>a</sup>np, number of parameters.</p><p><sup>b</sup>LRT, likelihood ratio test.</p><p><sup>c<...
<p>Note.— <i>p</i>: Number of parameters including 15 branch lengths in the tree (<a href="http://ww...
Abstract. Sequences for multiple protein-coding genes are now commonly available from several, of-te...
<p>The likelihood values and the respective estimated parameters are shown for each model. The ω rat...
<p>The Cα and Cβ paralogs are a result of a gene duplication in a common ancestor of vertebrates. Su...
FIGURE 3. Bayesian consensus tree for Neoplecostomus species obtained from 5 million generations. Nu...
Species-specific branch selection tests. The one-ratio model (H0) was tested against the two-ratios ...
<p><b>A</b> Phylogenetic analysis of Cα orthologs resulted in a tree that was rooted with human and ...
<p>lnL, the log-likelihood difference between the two models; 2Δl, twice the log-likelihood differen...
<p>The phylogenetic tree of caspase-3A genes from different species was constructed using the neighb...
We present a method to detect copy number variants (CNVs) that are differentially present between tw...
<p>A likelihood ratio test (LRT) was performed to compare the likelihood scores (lnL) of the two nes...
<p>The Darwin selection pressures were detected by the branch-site models in the ancestral lineages ...
1<p>Number of parameters.</p>2<p>Twice the difference of ln [likelihood] between the two models comp...
<p>−2Δ<i>L</i>, likelihood ratio test to detect positive selection with 1 degree of freedom; Foregro...
<p><sup>a</sup>np, number of parameters.</p><p><sup>b</sup>LRT, likelihood ratio test.</p><p><sup>c<...
<p>Note.— <i>p</i>: Number of parameters including 15 branch lengths in the tree (<a href="http://ww...
Abstract. Sequences for multiple protein-coding genes are now commonly available from several, of-te...
<p>The likelihood values and the respective estimated parameters are shown for each model. The ω rat...
<p>The Cα and Cβ paralogs are a result of a gene duplication in a common ancestor of vertebrates. Su...
FIGURE 3. Bayesian consensus tree for Neoplecostomus species obtained from 5 million generations. Nu...
Species-specific branch selection tests. The one-ratio model (H0) was tested against the two-ratios ...
<p><b>A</b> Phylogenetic analysis of Cα orthologs resulted in a tree that was rooted with human and ...
<p>lnL, the log-likelihood difference between the two models; 2Δl, twice the log-likelihood differen...
<p>The phylogenetic tree of caspase-3A genes from different species was constructed using the neighb...
We present a method to detect copy number variants (CNVs) that are differentially present between tw...
<p>A likelihood ratio test (LRT) was performed to compare the likelihood scores (lnL) of the two nes...