<p>(A): SGoF's log-significance plot; (B): SGoF's number of effects; (C): SGoF's FDR; (D): SGoF's threshold for <i>p</i>-values. The proportion of true nulls for the computation of the FDRs was estimated according to Dalmasso et al. <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0015930#pone.0015930-Dalmasso1" target="_blank">[6]</a>, case <i>n</i> = 1.</p
<p>Minor allele frequency (MAF), minor genotypic frequency (MGF), −log10 (P-values) of the associati...
<p>(To increase readability, the log<sub>10</sub>(BFs) are truncated at 20). (A) Genome-wide log<sub...
<p>LD estimates were based on founders alone.</p>(1)<p>MAF: minor allele frequency based only on fou...
<p>(A): SGoF's log-significance plot; (B): SGoF's number of effects; (C): SGoF's FDR; (D): SGoF's th...
For each threshold of estimated using our corrected method (full pedigree analysis). The threshold f...
<p>The true positive rate (TPR, row 1), false discovery rate (FDR, row 2) and false positive rate (F...
<p>Functional enrichment analysis of a total of 1333 genes (FDR<0.1, <i>Limma</i>) resulted in 31 en...
<p>Proportion of 10,000 datasets simulated under the null hypothesis of no genotyping error and in t...
<p><sup>1</sup>Complete QTL list see <a href="http://www.plosone.org/article/info:doi/10.1371/journa...
<p>The density of the sum of the absolute SNP effects from GBLUP is plotted for sliding windows of 1...
<p>SNP-estimates are based on an additive model. Beta-estimates represent percentages of decline in ...
Estimates are shown in the top part of each graph and the corresponding P-values are shown below, in...
<p>The numbers indicate the percentages of uORFs that potentially have been eliminated by natural se...
T panel gives the scatter plot of the scan statistics using full pedigree and sibships. For largest ...
<p>(To increase readability, the log<sub>10</sub>(BFs) are truncated at 20). (A) Genome-wide log<sub...
<p>Minor allele frequency (MAF), minor genotypic frequency (MGF), −log10 (P-values) of the associati...
<p>(To increase readability, the log<sub>10</sub>(BFs) are truncated at 20). (A) Genome-wide log<sub...
<p>LD estimates were based on founders alone.</p>(1)<p>MAF: minor allele frequency based only on fou...
<p>(A): SGoF's log-significance plot; (B): SGoF's number of effects; (C): SGoF's FDR; (D): SGoF's th...
For each threshold of estimated using our corrected method (full pedigree analysis). The threshold f...
<p>The true positive rate (TPR, row 1), false discovery rate (FDR, row 2) and false positive rate (F...
<p>Functional enrichment analysis of a total of 1333 genes (FDR<0.1, <i>Limma</i>) resulted in 31 en...
<p>Proportion of 10,000 datasets simulated under the null hypothesis of no genotyping error and in t...
<p><sup>1</sup>Complete QTL list see <a href="http://www.plosone.org/article/info:doi/10.1371/journa...
<p>The density of the sum of the absolute SNP effects from GBLUP is plotted for sliding windows of 1...
<p>SNP-estimates are based on an additive model. Beta-estimates represent percentages of decline in ...
Estimates are shown in the top part of each graph and the corresponding P-values are shown below, in...
<p>The numbers indicate the percentages of uORFs that potentially have been eliminated by natural se...
T panel gives the scatter plot of the scan statistics using full pedigree and sibships. For largest ...
<p>(To increase readability, the log<sub>10</sub>(BFs) are truncated at 20). (A) Genome-wide log<sub...
<p>Minor allele frequency (MAF), minor genotypic frequency (MGF), −log10 (P-values) of the associati...
<p>(To increase readability, the log<sub>10</sub>(BFs) are truncated at 20). (A) Genome-wide log<sub...
<p>LD estimates were based on founders alone.</p>(1)<p>MAF: minor allele frequency based only on fou...