Table S9. Χ2 associations between gene presence and carbon traits. The “Same” column represents the number of times a gene was present and there was growth on the carbon source. The “Different” column represents the count of gene absence and growth plus gene presence and no growth. We corrected for multiple tests across associations with the Benjamini–Hochberg correction (q < 0.05 considered significant), which is represented by the column labeled “p Adj ”. (XLSX 11 kb
Table is for the result of 105 TFs conducted by âTest For Trend In Proportionsâ (prop.trend.test...
Additional file 3. File 1. This file lists the association between the gene and the article mentioni...
Figure S9. Fractions of genes with unknown function. Each bar indicates the fraction of genes with u...
Table S1. Growth validation of 240 yeasts on four carbon sources. Growth on a carbon source was scor...
Table S6. Number of positive, negative, and random associations among carbon utilization traits. (XL...
Table S2. All pairwise trait associations. The âDirectionâ column indicates whether a trait asso...
Table S12. Proportion of correctly predicted traits across each method implemented to handle missing...
Table S10. Species trait matrix, scored with growth (+), no growth (â), variable (v), or data unav...
Figure S3. Genes show pleiotropic functions for carbon utilization. We determined gene presence for ...
Table S7. Assigned functional categories used statistically to analyze the similarities between carb...
Table S8. Gene and trait presence for 79 species with curated genome sequences [55]. Gene presence w...
Table S5. Pairwise association quantifications among traits and isolation environments. The âDirec...
Figure S1. Hierarchical cluster analysis of traits, using similarities among trait associations. The...
Table S4. Species isolation environment matrix. A value of 1 means the species was isolated from tha...
Figure S2. Bar graph of number of species found in each isolation environment. (PDF 185 kb
Table is for the result of 105 TFs conducted by âTest For Trend In Proportionsâ (prop.trend.test...
Additional file 3. File 1. This file lists the association between the gene and the article mentioni...
Figure S9. Fractions of genes with unknown function. Each bar indicates the fraction of genes with u...
Table S1. Growth validation of 240 yeasts on four carbon sources. Growth on a carbon source was scor...
Table S6. Number of positive, negative, and random associations among carbon utilization traits. (XL...
Table S2. All pairwise trait associations. The âDirectionâ column indicates whether a trait asso...
Table S12. Proportion of correctly predicted traits across each method implemented to handle missing...
Table S10. Species trait matrix, scored with growth (+), no growth (â), variable (v), or data unav...
Figure S3. Genes show pleiotropic functions for carbon utilization. We determined gene presence for ...
Table S7. Assigned functional categories used statistically to analyze the similarities between carb...
Table S8. Gene and trait presence for 79 species with curated genome sequences [55]. Gene presence w...
Table S5. Pairwise association quantifications among traits and isolation environments. The âDirec...
Figure S1. Hierarchical cluster analysis of traits, using similarities among trait associations. The...
Table S4. Species isolation environment matrix. A value of 1 means the species was isolated from tha...
Figure S2. Bar graph of number of species found in each isolation environment. (PDF 185 kb
Table is for the result of 105 TFs conducted by âTest For Trend In Proportionsâ (prop.trend.test...
Additional file 3. File 1. This file lists the association between the gene and the article mentioni...
Figure S9. Fractions of genes with unknown function. Each bar indicates the fraction of genes with u...