<p>(A) Normalised log2 transformed gene expression data was compared in a box plot to ensure that normalisation was equal between the samples of the bead-array. Error bars show standard deviation (SD). (B) PCA-plot of the top 500 probe sets p<0.05 comparisons to control to show that the replicates within the gene expression data group according to treatments. (C, E) Venn diagrams were constructed from the upregulated genes, (C) fold change (fc) >1.5 with a p-value <0.05 after 2hs or (E) 6 hs of: Control, Hypoxia, or oxygen and glucose deprivation (OGD). (D, F) Venn diagrams of down regulated genes fc<0.66, p-value <0.05 in (D) 2h or (F) 6 h treatments as in (C, E).</p
Residual maximum likelihood (REML) analysis of variance of the effects of hypoxia (normoxic control ...
<p>(<b>A</b>) Gene-set enrichment analysis on a set of 11673 genes sorted by their response to hypox...
<p>(A) Heatmap of processed expression values for 368 dysregulated genes showing absolute logFC ≥ 1 ...
The aim of our work was to show how a chosen normal-isation strategy can affect the outcome of quant...
<p>Clustred log2 ratios of gene expression of hypoxic seizure relative to time-matched normoxic cont...
<p>Several up-regulated genes at the translational level (translatome) in hypoxic HCT116 cells were ...
<p><u>Panel A:</u> Plot of gene expression averaged from 3 biological replicates for those DEGs foun...
<p>Most of the genes show only small changes not exceding an up-regulation of a factor of 2 while so...
<p>cDNA levels from HCT116 cells grown in hypoxia (A) and hypoglycaemia (B) were measured for the ge...
<p>(A) Western blots show protein levels of HIF1α and HIF2α in MCF-7 cells after 24 hours under the ...
<p>(<b>A</b>) Student's <i>t</i>-test analysis was applied to the microarray data to identify all ge...
<p>(A) The results of differential gene expression analysis comparing NGD and GD samples are visuali...
<p>Bound regulated genes (BRGs) with transcription factor occupancy within 5Kbp of a TSS for STAT3 a...
a<p>Threshold of 1.5 fold (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone...
<p>Panel A indicates those genes up-regulated (upper) and down-regulated (lower) by anoxia treatment...
Residual maximum likelihood (REML) analysis of variance of the effects of hypoxia (normoxic control ...
<p>(<b>A</b>) Gene-set enrichment analysis on a set of 11673 genes sorted by their response to hypox...
<p>(A) Heatmap of processed expression values for 368 dysregulated genes showing absolute logFC ≥ 1 ...
The aim of our work was to show how a chosen normal-isation strategy can affect the outcome of quant...
<p>Clustred log2 ratios of gene expression of hypoxic seizure relative to time-matched normoxic cont...
<p>Several up-regulated genes at the translational level (translatome) in hypoxic HCT116 cells were ...
<p><u>Panel A:</u> Plot of gene expression averaged from 3 biological replicates for those DEGs foun...
<p>Most of the genes show only small changes not exceding an up-regulation of a factor of 2 while so...
<p>cDNA levels from HCT116 cells grown in hypoxia (A) and hypoglycaemia (B) were measured for the ge...
<p>(A) Western blots show protein levels of HIF1α and HIF2α in MCF-7 cells after 24 hours under the ...
<p>(<b>A</b>) Student's <i>t</i>-test analysis was applied to the microarray data to identify all ge...
<p>(A) The results of differential gene expression analysis comparing NGD and GD samples are visuali...
<p>Bound regulated genes (BRGs) with transcription factor occupancy within 5Kbp of a TSS for STAT3 a...
a<p>Threshold of 1.5 fold (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone...
<p>Panel A indicates those genes up-regulated (upper) and down-regulated (lower) by anoxia treatment...
Residual maximum likelihood (REML) analysis of variance of the effects of hypoxia (normoxic control ...
<p>(<b>A</b>) Gene-set enrichment analysis on a set of 11673 genes sorted by their response to hypox...
<p>(A) Heatmap of processed expression values for 368 dysregulated genes showing absolute logFC ≥ 1 ...