Segmented simulated LE profiles.

<p>(A) The reconstruction performance, recall versus precision when running ChromoTrace for whole genome and individual chromosomes. (B) The percent of missing probes across all 100 simulations for all of the polymer chains and a single chain. (C) The percent of LE’s that were clustered into the wrong locus for the whole genome and chromosome 20. (D) the percent of clusters that contained LE’s from multiple starting loci.