a)<p>Bait specifies the protein that was used to capture each network.</p>b)<p>The p-value after permutation for each HLA risk group.</p>c)<p>The p-value without HLA risk group stratification as a reference.</p>d)<p>The p-value for each protein network after correction with the reference.</p
<p>The table lists the log<sub>10</sub> of the <i>p</i>-values that estimate the probability of obta...
<p>The network is associated with cancer disease. Solid lines correspond to direct protein-to-protei...
<p>Solid arrows denote true-positives and dashed arrows denote false-positives. True-negatives and f...
<p>Summarization of the genes occurring most frequently in the network modules for each HLA risk gro...
<p><b>A</b>) DR3/DR3: most extreme deviation higher D = 0.2083, p<0.001. <b>B</b>) DR3/DRX: most ext...
<p><b>A</b>) displays the consensus network for the DR3/DR3 and the DR3/DRX risk groups. <b>B</b>) d...
<p>The list of biological networks was generated using the Analyze Networks (AN) algorithm with defa...
<p>Networks significantly down-regulated by thrombin treatment as determined by Ingenuity Pathway An...
<p>The colored lines show the precision and recall tradeoffs as a function of different values of Ja...
<p>The top ranked 1,500 proteins by network proximity score <i>s<sub>i</sub></i> (on the right of th...
Top 5 networks identified using ingenuity pathway analysis (IPA) for differentially expressed protei...
<p>Pareto front of de-immunized designs in percent change compared to the wild type with k = 1,2,3 m...
<p>The green and pink objects represent known LQTS genes and candidate pathogenic genes identified i...
<p>(<b>Top row</b>) Effect of mutations on binding affinity to 10 most protective HLA molecules acco...
<p>Risk is modules category, ID indicate the identifier of cancer-risk modules, size is the module s...
<p>The table lists the log<sub>10</sub> of the <i>p</i>-values that estimate the probability of obta...
<p>The network is associated with cancer disease. Solid lines correspond to direct protein-to-protei...
<p>Solid arrows denote true-positives and dashed arrows denote false-positives. True-negatives and f...
<p>Summarization of the genes occurring most frequently in the network modules for each HLA risk gro...
<p><b>A</b>) DR3/DR3: most extreme deviation higher D = 0.2083, p<0.001. <b>B</b>) DR3/DRX: most ext...
<p><b>A</b>) displays the consensus network for the DR3/DR3 and the DR3/DRX risk groups. <b>B</b>) d...
<p>The list of biological networks was generated using the Analyze Networks (AN) algorithm with defa...
<p>Networks significantly down-regulated by thrombin treatment as determined by Ingenuity Pathway An...
<p>The colored lines show the precision and recall tradeoffs as a function of different values of Ja...
<p>The top ranked 1,500 proteins by network proximity score <i>s<sub>i</sub></i> (on the right of th...
Top 5 networks identified using ingenuity pathway analysis (IPA) for differentially expressed protei...
<p>Pareto front of de-immunized designs in percent change compared to the wild type with k = 1,2,3 m...
<p>The green and pink objects represent known LQTS genes and candidate pathogenic genes identified i...
<p>(<b>Top row</b>) Effect of mutations on binding affinity to 10 most protective HLA molecules acco...
<p>Risk is modules category, ID indicate the identifier of cancer-risk modules, size is the module s...
<p>The table lists the log<sub>10</sub> of the <i>p</i>-values that estimate the probability of obta...
<p>The network is associated with cancer disease. Solid lines correspond to direct protein-to-protei...
<p>Solid arrows denote true-positives and dashed arrows denote false-positives. True-negatives and f...