<p>The mean period of oscillation is 24.9 hrs+/−0.09 hrs. B. Blue bars show the frequency (count/2436) of the 2436 genes displayed in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0003105#pone-0003105-g006" target="_blank">Fig. 6</a> by their phase φ. A phase φ of 100% corresponds to a phase of 2 π radians. The phase is also reported in hours on a separate scale. For comparison, red bars show the distribution of period and phase for <i>clock-controlled genes</i> in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0003105#pone-0003105-g015" target="_blank">Fig. 15</a> as well. In Panel B the mean phase of <i>clock controlled genes</i> by functional category from <a href="http://www.plosone.org/art...
<p>(<b>A</b>) Shown is the heatmap generated with the list of 45 discriminative genes. Heatmaps were...
<p>Genes declared to be periodic by Cyclebase are indicated by (per). The numbers in the second, thi...
<p>For each respective plot: the black circle (WT), red circle (MT<sub>1</sub><sup>-/-</sup>) and bl...
<p>Upper panel: Histogram of phase lags of common genes in two tissue combinations. Different colors...
<p>Analysis of temporal expression profiles of 5708 expressed genes in two microarray replicates ide...
<p>24-hour cycling genes (p<0.0011 for both genotypes, period ≥20 hours, N = 92) identified in both ...
<p>Upper panel: Heatmaps showing mean expression data from 3 animals sacrificed at the same time poi...
<p><b>A</b> Comparison of the phases (i.e., times of peak abundance) of transcripts and proteins for...
<div><p>(A) Expression data for the top 750 genes is shown, with genes ordered by time of peak expre...
<p>Ensemble mean and ensemble standard deviation σ(X): = [2>−<sup>2</sup>]<sup>1/2</sup> for rate c...
<p>(A) Phase histograms for cyclic genes. A selection of 284 genes (<i>p</i><0.004, FDR = 0.3) showi...
<p>(A-K) Genes with overall differences in expression levels in <i>rve8-1</i>, graphed with the phas...
<p>Expression values for each data point (±SE) are plotted as the average relative expression level ...
<p>Rhythmic genes shown are those that are identified with eJTK_aby4 with a Benjamini-Hochberg adjus...
<p>The bright green is −3, and the bright red is +3 is expression level on a decadic log scale. Data...
<p>(<b>A</b>) Shown is the heatmap generated with the list of 45 discriminative genes. Heatmaps were...
<p>Genes declared to be periodic by Cyclebase are indicated by (per). The numbers in the second, thi...
<p>For each respective plot: the black circle (WT), red circle (MT<sub>1</sub><sup>-/-</sup>) and bl...
<p>Upper panel: Histogram of phase lags of common genes in two tissue combinations. Different colors...
<p>Analysis of temporal expression profiles of 5708 expressed genes in two microarray replicates ide...
<p>24-hour cycling genes (p<0.0011 for both genotypes, period ≥20 hours, N = 92) identified in both ...
<p>Upper panel: Heatmaps showing mean expression data from 3 animals sacrificed at the same time poi...
<p><b>A</b> Comparison of the phases (i.e., times of peak abundance) of transcripts and proteins for...
<div><p>(A) Expression data for the top 750 genes is shown, with genes ordered by time of peak expre...
<p>Ensemble mean and ensemble standard deviation σ(X): = [2>−<sup>2</sup>]<sup>1/2</sup> for rate c...
<p>(A) Phase histograms for cyclic genes. A selection of 284 genes (<i>p</i><0.004, FDR = 0.3) showi...
<p>(A-K) Genes with overall differences in expression levels in <i>rve8-1</i>, graphed with the phas...
<p>Expression values for each data point (±SE) are plotted as the average relative expression level ...
<p>Rhythmic genes shown are those that are identified with eJTK_aby4 with a Benjamini-Hochberg adjus...
<p>The bright green is −3, and the bright red is +3 is expression level on a decadic log scale. Data...
<p>(<b>A</b>) Shown is the heatmap generated with the list of 45 discriminative genes. Heatmaps were...
<p>Genes declared to be periodic by Cyclebase are indicated by (per). The numbers in the second, thi...
<p>For each respective plot: the black circle (WT), red circle (MT<sub>1</sub><sup>-/-</sup>) and bl...