<p>Rhythmic genes shown are those that are identified with eJTK_aby4 with a Benjamini-Hochberg adjusted <i>p</i>-value less than 0.05. The terms shown are those identified by the DAVID web tool [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1004094#pcbi.1004094.ref051" target="_blank">51</a>, <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1004094#pcbi.1004094.ref052" target="_blank">52</a>] as enriched with a Benjamini-Hochberg adjusted <i>p</i>-value less than 0.05. (A) The individual annotation terms are shown with their adjusted <i>p</i>-values and phase distributions. The red numbers refer to the number of genes in that annotation term with that phase. The horizontal axis of A is ...
Author summary To be active, genes have to be transcribed to RNA. For some genes, the transcription ...
<p>The values presented here are mean<u>+</u>SEM (n = 6) of normalized expression. Statistical diffe...
1<p>) Number of CpGs that were identified as uniquely un-methylated.</p>2<p>) Number of TS-DMS locat...
<p>Annotations for the genes with differential expression levels in <i>rve8-1</i> after correction f...
<div><p>Robust methods for identifying patterns of expression in genome-wide data are important for ...
<p>The mean period of oscillation is 24.9 hrs+/−0.09 hrs. B. Blue bars show the frequency (count/243...
<p>Analysis of temporal expression profiles of 5708 expressed genes in two microarray replicates ide...
<p>Functional annotation analyses (Gene Ontology) were performed using 2 sets of genes (genes changi...
<p>The 65 significant genes (133 overlapped probes) which were differentially regulated in H99 compa...
<p>The discovered gene groups were ranked according to the EASE enrichment score, which is the minus...
<p>A) The percentage of transcripts specifically enriched in each of the circadian neuronal groups i...
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression ...
<p>Upper panel: Histogram of phase lags of common genes in two tissue combinations. Different colors...
One of the key research topics of post-genome study is annotation of the gene with regards to specif...
The nycthemeral transcriptome embodies all genes displaying a rhythmic variation of their mRNAs peri...
Author summary To be active, genes have to be transcribed to RNA. For some genes, the transcription ...
<p>The values presented here are mean<u>+</u>SEM (n = 6) of normalized expression. Statistical diffe...
1<p>) Number of CpGs that were identified as uniquely un-methylated.</p>2<p>) Number of TS-DMS locat...
<p>Annotations for the genes with differential expression levels in <i>rve8-1</i> after correction f...
<div><p>Robust methods for identifying patterns of expression in genome-wide data are important for ...
<p>The mean period of oscillation is 24.9 hrs+/−0.09 hrs. B. Blue bars show the frequency (count/243...
<p>Analysis of temporal expression profiles of 5708 expressed genes in two microarray replicates ide...
<p>Functional annotation analyses (Gene Ontology) were performed using 2 sets of genes (genes changi...
<p>The 65 significant genes (133 overlapped probes) which were differentially regulated in H99 compa...
<p>The discovered gene groups were ranked according to the EASE enrichment score, which is the minus...
<p>A) The percentage of transcripts specifically enriched in each of the circadian neuronal groups i...
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression ...
<p>Upper panel: Histogram of phase lags of common genes in two tissue combinations. Different colors...
One of the key research topics of post-genome study is annotation of the gene with regards to specif...
The nycthemeral transcriptome embodies all genes displaying a rhythmic variation of their mRNAs peri...
Author summary To be active, genes have to be transcribed to RNA. For some genes, the transcription ...
<p>The values presented here are mean<u>+</u>SEM (n = 6) of normalized expression. Statistical diffe...
1<p>) Number of CpGs that were identified as uniquely un-methylated.</p>2<p>) Number of TS-DMS locat...