<p>Each plotted point represents a Ti value calculated as the average fitness of a pair of recombinant viruses with reciprocally exchanged <i>MP</i> genes (cyan circles), <i>CP</i> genes (orange diamonds), <i>Rep</i> genes (blue inverted triangles), SIR (red triangles), or LIR (green squares) divided by the average fitness of their parental viruses. Error bars represent the standard deviations of Ti values. Curved lines represent quadratic regressions of Ti values against parental SIR, <i>MP,</i> LIR, <i>CP,</i> and <i>Rep</i> nucleotide sequences.</p
Each point represents a chromosome (n = 665). Species are presented in different colours (57 species...
<p><b>A</b>) Relative fitness of the 21 viable mutants in CEMx174 cells. Values shown are an average...
<p>A) Average recombination rates (on a logarithmic scale) for DNA repeats as a function of average ...
<p>We used the quadratic regressions presented in <a href="http://www.plosgenetics.org/article/info:...
<p>Orange and blue bars correspond to runs with and without recombination, respectively. Panel A sho...
<p>Five genome regions corresponding to the three MSV genes <i>(MP, CP,</i> and <i>Rep)</i> and two ...
(A) Distribution of chromosome Spearman’s rank correlations between the number of genes and the reco...
<p>Comparison of two parental viruses IAB TrD and IE 68U201 and four chimeric viruses, IAB/IE/IAB, I...
<p>(A) Fifteen p2-INT-recombinant viruses (i.e., 14 INSTI-resistance and the HIV-1<sub>NL4-3</sub> w...
<p>(<b>A</b>) Depicted are the means (black lines) and ranges (gray backgrounds) of predicted degree...
<p>Each point is the mean (<i>n</i> = 3, ± standard error of the mean) change in log<sub>10</sub> fi...
Top legend indicates the locations of protein coding genes, bottom legend indicates position in the ...
<p>Each of the four nonhomologous selected CV-B4/MAD4 recombinants presented in <a href="http://www....
<p>The evolution of (A) viral diversity, <i>d<sub>G</sub></i>, (B) divergence, <i>d<sub>S</sub></i>,...
<p>A) Influence of sequence identity and local RNA structure on recombination junctions. The central...
Each point represents a chromosome (n = 665). Species are presented in different colours (57 species...
<p><b>A</b>) Relative fitness of the 21 viable mutants in CEMx174 cells. Values shown are an average...
<p>A) Average recombination rates (on a logarithmic scale) for DNA repeats as a function of average ...
<p>We used the quadratic regressions presented in <a href="http://www.plosgenetics.org/article/info:...
<p>Orange and blue bars correspond to runs with and without recombination, respectively. Panel A sho...
<p>Five genome regions corresponding to the three MSV genes <i>(MP, CP,</i> and <i>Rep)</i> and two ...
(A) Distribution of chromosome Spearman’s rank correlations between the number of genes and the reco...
<p>Comparison of two parental viruses IAB TrD and IE 68U201 and four chimeric viruses, IAB/IE/IAB, I...
<p>(A) Fifteen p2-INT-recombinant viruses (i.e., 14 INSTI-resistance and the HIV-1<sub>NL4-3</sub> w...
<p>(<b>A</b>) Depicted are the means (black lines) and ranges (gray backgrounds) of predicted degree...
<p>Each point is the mean (<i>n</i> = 3, ± standard error of the mean) change in log<sub>10</sub> fi...
Top legend indicates the locations of protein coding genes, bottom legend indicates position in the ...
<p>Each of the four nonhomologous selected CV-B4/MAD4 recombinants presented in <a href="http://www....
<p>The evolution of (A) viral diversity, <i>d<sub>G</sub></i>, (B) divergence, <i>d<sub>S</sub></i>,...
<p>A) Influence of sequence identity and local RNA structure on recombination junctions. The central...
Each point represents a chromosome (n = 665). Species are presented in different colours (57 species...
<p><b>A</b>) Relative fitness of the 21 viable mutants in CEMx174 cells. Values shown are an average...
<p>A) Average recombination rates (on a logarithmic scale) for DNA repeats as a function of average ...