Neighbour-joining phylogram showing phylogenetic relationships between different large subunit rRNA gene sequences from Pulmonaria officinalis nectar-inhabiting yeasts and reference sequences of the most related type strains found in GenBank.

Data from: Ribosomal DNA sequence heterogeneity reflects intra-species phylogenies and predicts genome structure in two contrasting yeast species

West, Claire
James, Stephen A.
Davey, Robert P.
Dicks, Jo
Roberts, Ian N.

The ribosomal RNA encapsulates a wealth of evolutionary information, including genetic variation tha...

Relationship between population size (number of flowering ramets) and the number of bacterial and yeast OTUs (based on a DNA dissimilarity cut-off value of 1%) in the floral nectar of Pulmonaria officinalis.

Hans Jacquemyn (147555)
Marijke Lenaerts (387659)
Rein Brys (387660)
Kris Willems (387661)
Olivier Honnay (387662)
Bart Lievens (147571)

March 2013

Relationship between population size (number of flowering ramets) and the number of bacterial and...

Neighbor-joining phylogenetic tree based on 16S rRNA sequences.

Salem, Wesam

June 2020

Supplementary Figure (S1): Bayesian 50% majority rule phylogram of 16S ribosomal RNA region showing ...

Neighbour-joining phylogram showing phylogenetic relationships between 16S rRNA gene sequences from Pulmonaria officinalis nectar-inhabiting bacteria and reference sequences of the most related type strains found in GenBank.

Hans Jacquemyn (147555)
Marijke Lenaerts (387659)
Rein Brys (387660)
Kris Willems (387661)
Olivier Honnay (387662)
Bart Lievens (147571)

March 2013

For ease of visualization, the dataset was limited to one representative sequence (see <a href="h...

Phylogenetic placement of the yeast isolates associated with Doubledaya bucculenta.

Wataru Toki (313682)
Yukiko Takahashi (480378)
Katsumi Togashi (313684)

November 2013

(A) A neighbor-joining phylogeny inferred from DNA sequences of D1/D2 domain of 26S rRNA gene (53...

Genetic relationships between the 11 yeast accessions for which genomic sequence is available.

J. Roman Arguello (272625)
Carolina Sellanes (447316)
Yann Ru Lou (447317)
Robert A. Raguso (447318)

August 2013

Left: Inferred proportion of ancestry estimated for 2–5 genetic clusters. Right: A Neighbor Joini...

Neighbor-joining tree of strain KR0006 based on its 16S rRNA gene sequence showing the phylogenetic relationship with related Streptomyces species.

Young Sook Kim (296234)
Mirjalol Umurzokov (13864125)
Kwang Min Cho (13864128)
Jung Sup Choi (4729410)
Kee Woong Park (13864131)

September 2022

Numbers at each branch node indicate the bootstrap percentage of 1000 replications.</p

Maximum likelihood (ML) phylogenetic tree of ribosomal gene sequences.

Olga A. Glazunova (5329184)
Natalia V. Shakhova (5329193)
Nadezhda V. Psurtseva (5329187)
Konstantin V. Moiseenko (3842116)
Sergei Y. Kleimenov (5329190)
Tatiana V. Fedorova (3842110)

June 2018

Numbers at nodes are bootstrap percentages from 100 replicates. Fungi from the residual and the c...

16S rRNA phylogenetic tree.

Anastasia Venieraki (633800)
Maria Dimou (633801)
Eleni Vezyri (633802)
Alexandros Vamvakas (633803)
Pagona-Artemis Katinaki (633804)
Iordanis Chatzipavlidis (633805)
Anastasia Tampakaki (633806)
Panagiotis Katinakis (633807)

September 2014

Neighbor-Joining phylogenetic tree of 16S rRNA gene constructed using the partial nucleotide sequ...

Phylogenetic placement of the yeast strains associated with Doubledaya bucculenta.

Wataru Toki (313682)
Masahiko Tanahashi (313683)
Katsumi Togashi (313684)
Takema Fukatsu (212067)

February 2013

(A) A maximum parsimony phylogeny inferred from 26S rRNA gene sequences (530 bps). (B) A maximum ...

Data from: Ribosomal DNA sequence heterogeneity reflects intra-species phylogenies and predicts genome structure in two contrasting yeast species

West, Claire
James, Stephen A.
Davey, Robert P.
Dicks, Jo
Roberts, Ian N.

March 2014

The ribosomal RNA encapsulates a wealth of evolutionary information, including genetic variation tha...

Data from: Ribosomal DNA sequence heterogeneity reflects intra-species phylogenies and predicts genome structure in two contrasting yeast species

West, Claire
James, Stephen A.
Davey, Robert P.
Dicks, Jo
Roberts, Ian N.

March 2014

The ribosomal RNA encapsulates a wealth of evolutionary information, including genetic variation tha...

Shyh-Ching Lo (65421)
Guo-Chiuan Hung (142364)
Bingjie Li (142361)
Haiyan Lei (234120)
Tianwei Li (470417)
Kenjiro Nagamine (470418)
Jing Zhang (23775)
Shien Tsai (65420)
Richard Bryant (470419)

October 2013

Phylogenetic analysis based on 16S rRNA gene sequences (A) and whole rRNA operon sequences (B) us...

Phylogenetic tree depicting relationships between Pneumocystis organisms isolated from A. sylvaticus of different trapping locations.

Christine Demanche (715875)
Manjula Deville (715876)
Johan Michaux (380884)
Véronique Barriel (715877)
Claire Pinçon (349849)
Cécile Marie Aliouat-Denis (715878)
Muriel Pottier (349848)
Christophe Noël (715879)
Eric Viscogliosi (111438)
El Moukhtar Aliouat (193695)
Eduardo Dei-Cas (111441)
Serge Morand (74749)
Jacques Guillot (112935)

April 2015

NJ, MP, ML and MB are inferred from the combined mitochondrial small subunit (mtSSU) and large su...

Neighbor joining phylogenetic tree of Firmicutes.

Kirk E. Anderson (448990)
Timothy H. Sheehan (498532)
Brendon M. Mott (498533)
Patrick Maes (498534)
Lucy Snyder (498535)
Melissa R. Schwan (498536)
Alexander Walton (498537)
Beryl M. Jones (498538)
Vanessa Corby-Harris (245633)

December 2013

Tree based on 1076 positions of the 16S-rDNA bacterial sequence from beebread, honey, alimentary ...

Data from: Ribosomal DNA sequence heterogeneity reflects intra-species phylogenies and predicts genome structure in two contrasting yeast species

West, Claire
James, Stephen A.
Davey, Robert P.
Dicks, Jo
Roberts, Ian N.

The ribosomal RNA encapsulates a wealth of evolutionary information, including genetic variation tha...

Relationship between population size (number of flowering ramets) and the number of bacterial and yeast OTUs (based on a DNA dissimilarity cut-off value of 1%) in the floral nectar of Pulmonaria officinalis.

Hans Jacquemyn (147555)
Marijke Lenaerts (387659)
Rein Brys (387660)
Kris Willems (387661)
Olivier Honnay (387662)
Bart Lievens (147571)

March 2013

Relationship between population size (number of flowering ramets) and the number of bacterial and...

Neighbor-joining phylogenetic tree based on 16S rRNA sequences.

Salem, Wesam

June 2020

Supplementary Figure (S1): Bayesian 50% majority rule phylogram of 16S ribosomal RNA region showing ...

Neighbour-joining phylogram showing phylogenetic relationships between 16S rRNA gene sequences from Pulmonaria officinalis nectar-inhabiting bacteria and reference sequences of the most related type strains found in GenBank.

Hans Jacquemyn (147555)
Marijke Lenaerts (387659)
Rein Brys (387660)
Kris Willems (387661)
Olivier Honnay (387662)
Bart Lievens (147571)

March 2013

For ease of visualization, the dataset was limited to one representative sequence (see <a href="h...

Phylogenetic placement of the yeast isolates associated with Doubledaya bucculenta.

Wataru Toki (313682)
Yukiko Takahashi (480378)
Katsumi Togashi (313684)

November 2013

(A) A neighbor-joining phylogeny inferred from DNA sequences of D1/D2 domain of 26S rRNA gene (53...

Genetic relationships between the 11 yeast accessions for which genomic sequence is available.

J. Roman Arguello (272625)
Carolina Sellanes (447316)
Yann Ru Lou (447317)
Robert A. Raguso (447318)

August 2013

Left: Inferred proportion of ancestry estimated for 2–5 genetic clusters. Right: A Neighbor Joini...

Neighbor-joining tree of strain KR0006 based on its 16S rRNA gene sequence showing the phylogenetic relationship with related Streptomyces species.

Young Sook Kim (296234)
Mirjalol Umurzokov (13864125)
Kwang Min Cho (13864128)
Jung Sup Choi (4729410)
Kee Woong Park (13864131)

September 2022

Numbers at each branch node indicate the bootstrap percentage of 1000 replications.</p

Maximum likelihood (ML) phylogenetic tree of ribosomal gene sequences.

Olga A. Glazunova (5329184)
Natalia V. Shakhova (5329193)
Nadezhda V. Psurtseva (5329187)
Konstantin V. Moiseenko (3842116)
Sergei Y. Kleimenov (5329190)
Tatiana V. Fedorova (3842110)

June 2018

Numbers at nodes are bootstrap percentages from 100 replicates. Fungi from the residual and the c...

16S rRNA phylogenetic tree.

Anastasia Venieraki (633800)
Maria Dimou (633801)
Eleni Vezyri (633802)
Alexandros Vamvakas (633803)
Pagona-Artemis Katinaki (633804)
Iordanis Chatzipavlidis (633805)
Anastasia Tampakaki (633806)
Panagiotis Katinakis (633807)

September 2014

Neighbor-Joining phylogenetic tree of 16S rRNA gene constructed using the partial nucleotide sequ...

Phylogenetic placement of the yeast strains associated with Doubledaya bucculenta.

Wataru Toki (313682)
Masahiko Tanahashi (313683)
Katsumi Togashi (313684)
Takema Fukatsu (212067)

February 2013

(A) A maximum parsimony phylogeny inferred from 26S rRNA gene sequences (530 bps). (B) A maximum ...

Data from: Ribosomal DNA sequence heterogeneity reflects intra-species phylogenies and predicts genome structure in two contrasting yeast species

West, Claire
James, Stephen A.
Davey, Robert P.
Dicks, Jo
Roberts, Ian N.

March 2014

The ribosomal RNA encapsulates a wealth of evolutionary information, including genetic variation tha...

Data from: Ribosomal DNA sequence heterogeneity reflects intra-species phylogenies and predicts genome structure in two contrasting yeast species

West, Claire
James, Stephen A.
Davey, Robert P.
Dicks, Jo
Roberts, Ian N.

March 2014

The ribosomal RNA encapsulates a wealth of evolutionary information, including genetic variation tha...

Shyh-Ching Lo (65421)
Guo-Chiuan Hung (142364)
Bingjie Li (142361)
Haiyan Lei (234120)
Tianwei Li (470417)
Kenjiro Nagamine (470418)
Jing Zhang (23775)
Shien Tsai (65420)
Richard Bryant (470419)

October 2013

Phylogenetic analysis based on 16S rRNA gene sequences (A) and whole rRNA operon sequences (B) us...

Phylogenetic tree depicting relationships between Pneumocystis organisms isolated from A. sylvaticus of different trapping locations.

Christine Demanche (715875)
Manjula Deville (715876)
Johan Michaux (380884)
Véronique Barriel (715877)
Claire Pinçon (349849)
Cécile Marie Aliouat-Denis (715878)
Muriel Pottier (349848)
Christophe Noël (715879)
Eric Viscogliosi (111438)
El Moukhtar Aliouat (193695)
Eduardo Dei-Cas (111441)
Serge Morand (74749)
Jacques Guillot (112935)

April 2015

NJ, MP, ML and MB are inferred from the combined mitochondrial small subunit (mtSSU) and large su...

Neighbor joining phylogenetic tree of Firmicutes.

Kirk E. Anderson (448990)
Timothy H. Sheehan (498532)
Brendon M. Mott (498533)
Patrick Maes (498534)
Lucy Snyder (498535)
Melissa R. Schwan (498536)
Alexander Walton (498537)
Beryl M. Jones (498538)
Vanessa Corby-Harris (245633)

December 2013

Tree based on 1076 positions of the 16S-rDNA bacterial sequence from beebread, honey, alimentary ...

Data from: Ribosomal DNA sequence heterogeneity reflects intra-species phylogenies and predicts genome structure in two contrasting yeast species

West, Claire
James, Stephen A.
Davey, Robert P.
Dicks, Jo
Roberts, Ian N.

The ribosomal RNA encapsulates a wealth of evolutionary information, including genetic variation tha...

Relationship between population size (number of flowering ramets) and the number of bacterial and yeast OTUs (based on a DNA dissimilarity cut-off value of 1%) in the floral nectar of Pulmonaria officinalis.

Hans Jacquemyn (147555)
Marijke Lenaerts (387659)
Rein Brys (387660)
Kris Willems (387661)
Olivier Honnay (387662)
Bart Lievens (147571)

March 2013

Relationship between population size (number of flowering ramets) and the number of bacterial and...

Neighbor-joining phylogenetic tree based on 16S rRNA sequences.

Salem, Wesam

June 2020

Supplementary Figure (S1): Bayesian 50% majority rule phylogram of 16S ribosomal RNA region showing ...

Neighbour-joining phylogram showing phylogenetic relationships between different large subunit rRNA gene sequences from <i>Pulmonaria officinalis</i> nectar-inhabiting yeasts and reference sequences of the most related type strains found in GenBank.

Abstract

Extracted data

Neighbour-joining phylogram showing phylogenetic relationships between different large subunit rRNA gene sequences from <i>Pulmonaria officinalis</i> nectar-inhabiting yeasts and reference sequences of the most related type strains found in GenBank.

Abstract

Extracted data

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