<p><b>A</b>. The histograms of the number of genes associated with each GO term before and after ontology-guided knowledge mining: 1) the original GO annotations for all responding genes (blue); and 2) the GO terms returned by the instance-based module search (red). <b>B</b>. The distribution of the levels of the above GO term sets in the ontology hierarchy are shown as normalized histograms. Level represents the root of the Biological Process namespace.</p
<p>The results are summarized in three main categories: biological process, molecular function and c...
<p>Each box has GO terms labeled by its GO ID, term definition and detailed information representing...
<p>GO terms in bold are those significant terms after adjustment for multiple testing (Benjamini-Hoc...
<p>Shown are pie charts presenting the relative abundance of the ten most frequently encountered gen...
Annotated gene ontology (GO) term distribution at 2-level for the three GO categories after GO-slim ...
<p>Enriched GO terms were found in groups of genes showing significantly higher transcript levels in...
<p>All the DEGs were mapped to GO terms in the database, and counted the frequency of genes in every...
<p>The results of BLASTX searches against the Phytozome database were used for GO term mapping and a...
<p>(<b>A</b>) Molecular function and (<b>B</b>) biological process GO terms. Line plots represent th...
Proportion of Gene Ontology (GO) terms per evaluation category with a precision/recall performance p...
<p>The GO terms are represented by circles, visualized in a semantic similarity-based scatter plot, ...
<p>The classification counts are shown for each of the first tier terms of the three GO database dom...
<p>The data represents the distribution of the annotated isotigs (black) and the annotated singleton...
<p>This figure shows 81 GO term assignments categorized in this transcriptome (14,249 transcripts).<...
<p>These GO terms showed a statistically significantly enriched representation. Enrichment Score of ...
<p>The results are summarized in three main categories: biological process, molecular function and c...
<p>Each box has GO terms labeled by its GO ID, term definition and detailed information representing...
<p>GO terms in bold are those significant terms after adjustment for multiple testing (Benjamini-Hoc...
<p>Shown are pie charts presenting the relative abundance of the ten most frequently encountered gen...
Annotated gene ontology (GO) term distribution at 2-level for the three GO categories after GO-slim ...
<p>Enriched GO terms were found in groups of genes showing significantly higher transcript levels in...
<p>All the DEGs were mapped to GO terms in the database, and counted the frequency of genes in every...
<p>The results of BLASTX searches against the Phytozome database were used for GO term mapping and a...
<p>(<b>A</b>) Molecular function and (<b>B</b>) biological process GO terms. Line plots represent th...
Proportion of Gene Ontology (GO) terms per evaluation category with a precision/recall performance p...
<p>The GO terms are represented by circles, visualized in a semantic similarity-based scatter plot, ...
<p>The classification counts are shown for each of the first tier terms of the three GO database dom...
<p>The data represents the distribution of the annotated isotigs (black) and the annotated singleton...
<p>This figure shows 81 GO term assignments categorized in this transcriptome (14,249 transcripts).<...
<p>These GO terms showed a statistically significantly enriched representation. Enrichment Score of ...
<p>The results are summarized in three main categories: biological process, molecular function and c...
<p>Each box has GO terms labeled by its GO ID, term definition and detailed information representing...
<p>GO terms in bold are those significant terms after adjustment for multiple testing (Benjamini-Hoc...