<p>Each of the four panels shows (top) an ideogram of the chromosome on which the featured gene is located and (below) an expanded view of a 4-Mb region centered on the featured gene, showing other genes in the area (location based on the UCSC Genome Browser). If the gene is large enough, the exon-intron structure and/or transcriptional direction of the gene are indicated. For most genes, particularly in panels C and D, the genes are shown as rectangles due to their smaller size. Shown below each expanded region are horizontal bars indicating the extent and boundaries of individual deletions in colon tumors (Panels A and B; <i>A2BP1</i> and <i>MACROD2</i>, respectively), lung tumors (Panel C; <i>CDKN2A/B</i>), or multiple tumor types (Panel...
<p>(A) A schematic of the experiment, which used a custom tiling array to determine if aphidicolin i...
<p>Scatter dot plots of values for statistics that distinguish focal deletions affecting common frag...
<p>For deletions A, 1, 5, 7 and 12, both breakpoint regions joined by the deletion are shown. These ...
One of the key questions about genomic alterations in cancer is whether they are functional in the s...
<p>(A) Average DNA segment size as a function of position on chromosome 1 is displayed. (B) the 9,40...
One of the key questions about genomic alterations in cancer is whether they are functional in the s...
<p>Genes that had 15 or more focal deletions (4,823) were analyzed by the unsupervised learning meth...
<p>(A) Box and whisker plots for “Deletion Size,” which measures the median size of deletions within...
<p>Several annotated genes and ESTs are present, the two deletions are indicated by black arrows (pa...
<p><b>A</b>: Graphic presentation of the upstream deletions into module a (−532 to −212). Horizontal...
<p>Panel A shows box plots with the distribution of tumors (n = 31) according to the percentage of t...
Background: Cancer development is accompanied by genetic phenomena like deletion and amplification o...
One of the key questions about genomic alterations in cancer is whether they are functional in the s...
<p>Overview of the <i>FOXL2</i> region (chr3:135099979–142458004; UCSC, Human Genome Browser, hg19) ...
<p>The left side shows the explored genome (Mb) in each chromosome arm that was explored with the 50...
<p>(A) A schematic of the experiment, which used a custom tiling array to determine if aphidicolin i...
<p>Scatter dot plots of values for statistics that distinguish focal deletions affecting common frag...
<p>For deletions A, 1, 5, 7 and 12, both breakpoint regions joined by the deletion are shown. These ...
One of the key questions about genomic alterations in cancer is whether they are functional in the s...
<p>(A) Average DNA segment size as a function of position on chromosome 1 is displayed. (B) the 9,40...
One of the key questions about genomic alterations in cancer is whether they are functional in the s...
<p>Genes that had 15 or more focal deletions (4,823) were analyzed by the unsupervised learning meth...
<p>(A) Box and whisker plots for “Deletion Size,” which measures the median size of deletions within...
<p>Several annotated genes and ESTs are present, the two deletions are indicated by black arrows (pa...
<p><b>A</b>: Graphic presentation of the upstream deletions into module a (−532 to −212). Horizontal...
<p>Panel A shows box plots with the distribution of tumors (n = 31) according to the percentage of t...
Background: Cancer development is accompanied by genetic phenomena like deletion and amplification o...
One of the key questions about genomic alterations in cancer is whether they are functional in the s...
<p>Overview of the <i>FOXL2</i> region (chr3:135099979–142458004; UCSC, Human Genome Browser, hg19) ...
<p>The left side shows the explored genome (Mb) in each chromosome arm that was explored with the 50...
<p>(A) A schematic of the experiment, which used a custom tiling array to determine if aphidicolin i...
<p>Scatter dot plots of values for statistics that distinguish focal deletions affecting common frag...
<p>For deletions A, 1, 5, 7 and 12, both breakpoint regions joined by the deletion are shown. These ...