<p>The first prediction is the model with the lowest energy. The best prediction is the best model out of the five lowest energies. All results are shown as C<i><sub>α</sub></i>RMSD to native structure. Models produced at iteration alone and iteration alone are compared. For comparison, the columns Rosetta show the same data obtained from a sample of Rosetta models randomly picked from Rosetta's prediction results.</p
<p>All structures generated during the initial RASREC run of target 1e6k are shown. A simple structu...
<p>The data shows the number of targets which have the native structure ranked as the lowest energy....
<p>The points in the plots represent Rosetta generated protein structure models. In column 1 and 3, ...
<p>1‰ C<i><sub>α</sub></i>RMSD is the average over the 1‰ lowest C<i><sub>α</sub></i>RMSD to native ...
a<p>The average rank of lowest energy decoy according to GDT_TS score (over 143 decoy sets) in the a...
<p>1‰ C<i><sub>α</sub></i>RMSD is the average over the 1‰ lowest C<i><sub>α</sub></i>RMSD to native ...
<p>Panels correspond exactly to panels in <a href="http://www.plosone.org/article/info:doi/10.1371/j...
<p>A) Experimental structures, B) models in which only the sidechains are repacked, and C) models in...
*<p>Full-atom interface energy in Rosetta energy units, median value of the 10 lowest-energy models....
Predicting the values of the potential energy surface (PES) for a given chemical system is essential...
SummaryWe describe an improved method for comparative modeling, RosettaCM, which optimizes a physica...
Automated analyses of the outcome of a simulation have been an important part of atomistic modeling ...
Statistical learning algorithms are finding more and more applications in science and technology. At...
We describe our efforts to prepare common starting structures and models for the SAMPL5 blind predic...
<p>A) Rankings represent the forward selection approach using selected minimal model structures; B) ...
<p>All structures generated during the initial RASREC run of target 1e6k are shown. A simple structu...
<p>The data shows the number of targets which have the native structure ranked as the lowest energy....
<p>The points in the plots represent Rosetta generated protein structure models. In column 1 and 3, ...
<p>1‰ C<i><sub>α</sub></i>RMSD is the average over the 1‰ lowest C<i><sub>α</sub></i>RMSD to native ...
a<p>The average rank of lowest energy decoy according to GDT_TS score (over 143 decoy sets) in the a...
<p>1‰ C<i><sub>α</sub></i>RMSD is the average over the 1‰ lowest C<i><sub>α</sub></i>RMSD to native ...
<p>Panels correspond exactly to panels in <a href="http://www.plosone.org/article/info:doi/10.1371/j...
<p>A) Experimental structures, B) models in which only the sidechains are repacked, and C) models in...
*<p>Full-atom interface energy in Rosetta energy units, median value of the 10 lowest-energy models....
Predicting the values of the potential energy surface (PES) for a given chemical system is essential...
SummaryWe describe an improved method for comparative modeling, RosettaCM, which optimizes a physica...
Automated analyses of the outcome of a simulation have been an important part of atomistic modeling ...
Statistical learning algorithms are finding more and more applications in science and technology. At...
We describe our efforts to prepare common starting structures and models for the SAMPL5 blind predic...
<p>A) Rankings represent the forward selection approach using selected minimal model structures; B) ...
<p>All structures generated during the initial RASREC run of target 1e6k are shown. A simple structu...
<p>The data shows the number of targets which have the native structure ranked as the lowest energy....
<p>The points in the plots represent Rosetta generated protein structure models. In column 1 and 3, ...