Comparison of COG-annotated genes between H. parasuis strains ZJ0906 and SH0165.

Complete Genome Analysis of a Haemophilus parasuis

Serovar Strain From China
Yufeng Li
Amy H. Y. Kwok
Jingwei Jiang
Yao Zou
Fangyuan Zheng
Pan Chen
Chengcai Hou
Frederick C. Leung Ping

January 2013

Haemophilus parasuis is the etiological agent of Glässer’s disease in pigs and 15 standard serovars...

Comparison of COG distribution in the virulence genes with the B. melitensis 16 M genome COG distribution.

Aniel Jessica Leticia Brambila-Tapia (588553)
Dagoberto Armenta-Medina (588554)
Nancy Rivera-Gomez (588555)
Ernesto Perez-Rueda (3273120)

June 2014

P value obtained with chi-squared test and Fisher exact test,*p-value ≤0.05. Abbreviations...

A pairwise genic comparison of 12 NTHi strains of and the reference strain Rd KW20

Justin S Hogg (48102)
Fen Z Hu (34099)
Benjamin Janto (34106)
Robert Boissy (34109)
Jay Hayes (48103)
Randy Keefe (48104)
J Christopher Post (48105)
Garth D Ehrlich (34110)

December 2011

The comparison of two strains is found at the intersection of the row and column corresponding to th...

COG class distribution of H.parasuis ZJ0906 genome.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

The COG-annotated genes are grouped under their respective COG classes. Only their class abbrevia...

KEGG-annotated genes not shared between H. parasuis strains ZJ0906 and SH0165.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

KEGG-annotated genes not shared between H. parasuis strains ZJ0906 and SH0165.</p

Comparison of the genome sequences of H. parasuis strains D74 and Nagasaki.

Tracy L. Nicholson (120395)
Brian W. Brunelle (376929)
Darrell O. Bayles (214795)
David P. Alt (4959304)
Sarah M. Shore (443720)

November 2018

(A) Distribution of protein-encoding genes in H. parasuis strains Nagasaki and D74. Venn diagram dem...

Comparison of the distribution of virulence associated genes (VAGs) between commensal and BSI strains.

Judit Burgaya (16734180)
Julie Marin (4793637)
Guilhem Royer (5212526)
Bénédicte Condamine (10752838)
Benoit Gachet (15448719)
Olivier Clermont (240697)
Françoise Jaureguy (16734183)
Charles Burdet (3440975)
Agnès Lefort (9666464)
Victoire de Lastours (5853464)
Erick Denamur (22049)
Marco Galardini (124666)
François Blanquart (3191950)

August 2023

VAG proportions of commensal and BSI strains are indicated between brackets. Significant differences...

Comparison of gene content in temperate Paenibacillus spp. and P. darwinianus strains by COG categories.

Melissa Dsouza (640377)
Michael W. Taylor (109094)
Susan J. Turner (640378)
Jackie Aislabie (640379)

October 2014

Comparison of gene content in temperate Paenibacillus spp. and P. darwinianus strai...

Genome features of SAGs and comparisons to their reference genome.

Philipp Engel (230434)
Ramunas Stepanauskas (170005)
Nancy A. Moran (12390)

September 2014

aS. alvi SAGs were compared to the reference genome of strain wkB2. G. apicola SAGs...

Strains by Comparative Genomic Analysis

Kittichotirat Weerayuth
Bumgarner Roger E.
Asikainen Sirkka
Chen Casey

July 2011

is genetically heterogeneous and comprises distinct clonal lineages that may have different virulen...

Summary of H. parasuis strains ZJ0906, SH0165 and 29755 genomes.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

Note: # denotes only draft genome was available for strain 29755; ˆ denotes percentage...

Comparative percentage of potential drug resistant genes.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

ARDB-annotated gene distribution of H. parasuis serovar 12 strain ZJ0906, serovar 5 strain...

Distribution of KOG annotations and comparison of the core and non-core (variable) genome of (16 strains of) E. huxleyi.

Jessica U. Kegel (486782)
Uwe John (107371)
Klaus Valentin (139492)
Stephan Frickenhaus (139495)

November 2013

KOG annotations of the E. huxleyi genome strain CCMP1516 (JGI) were used to identify functional c...

Venn diagram of M. avium strains TH135 and 104 genomes and comparison of COG functional categories between strain TH135- and 104-specific genes.

Kei-ichi Uchiya (448546)
Hiroyasu Takahashi (448547)
Tetsuya Yagi (238496)
Makoto Moriyama (448548)
Takayuki Inagaki (448549)
Kazuya Ichikawa (448550)
Taku Nakagawa (448551)
Toshiaki Nikai (448552)
Kenji Ogawa (448553)

August 2013

(A) Venn diagram showing the distribution of shared orthologues and strain-specific genes between...

Comparison of gene contents and numbers with reference strain KCTC11537.

Seong-Won Nho (486432)
Jun-ichi Hikima (108293)
Seong Bin Park (108286)
Ho Bin Jang (108268)
In Seok Cha (108281)
Motoshige Yasuike (387948)
Yoji Nakamura (387944)
Atsushi Fujiwara (486433)
Motohiko Sano (134553)
Kinya Kanai (486434)
Hidehiro Kondo (216450)
Ikuo Hirono (216454)
Haruko Takeyama (295088)
Takashi Aoki (108299)
Tae-Sung Jung (486435)

November 2013

As assessed by RAST functional categories grouped among insertion/deletion genes, between the KRS...

Complete Genome Analysis of a Haemophilus parasuis

Serovar Strain From China
Yufeng Li
Amy H. Y. Kwok
Jingwei Jiang
Yao Zou
Fangyuan Zheng
Pan Chen
Chengcai Hou
Frederick C. Leung Ping

January 2013

Haemophilus parasuis is the etiological agent of Glässer’s disease in pigs and 15 standard serovars...

Comparison of COG distribution in the virulence genes with the B. melitensis 16 M genome COG distribution.

Aniel Jessica Leticia Brambila-Tapia (588553)
Dagoberto Armenta-Medina (588554)
Nancy Rivera-Gomez (588555)
Ernesto Perez-Rueda (3273120)

June 2014

P value obtained with chi-squared test and Fisher exact test,*p-value ≤0.05. Abbreviations...

A pairwise genic comparison of 12 NTHi strains of and the reference strain Rd KW20

Justin S Hogg (48102)
Fen Z Hu (34099)
Benjamin Janto (34106)
Robert Boissy (34109)
Jay Hayes (48103)
Randy Keefe (48104)
J Christopher Post (48105)
Garth D Ehrlich (34110)

December 2011

The comparison of two strains is found at the intersection of the row and column corresponding to th...

COG class distribution of H.parasuis ZJ0906 genome.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

The COG-annotated genes are grouped under their respective COG classes. Only their class abbrevia...

KEGG-annotated genes not shared between H. parasuis strains ZJ0906 and SH0165.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

KEGG-annotated genes not shared between H. parasuis strains ZJ0906 and SH0165.</p

Comparison of the genome sequences of H. parasuis strains D74 and Nagasaki.

Tracy L. Nicholson (120395)
Brian W. Brunelle (376929)
Darrell O. Bayles (214795)
David P. Alt (4959304)
Sarah M. Shore (443720)

November 2018

(A) Distribution of protein-encoding genes in H. parasuis strains Nagasaki and D74. Venn diagram dem...

Comparison of the distribution of virulence associated genes (VAGs) between commensal and BSI strains.

Judit Burgaya (16734180)
Julie Marin (4793637)
Guilhem Royer (5212526)
Bénédicte Condamine (10752838)
Benoit Gachet (15448719)
Olivier Clermont (240697)
Françoise Jaureguy (16734183)
Charles Burdet (3440975)
Agnès Lefort (9666464)
Victoire de Lastours (5853464)
Erick Denamur (22049)
Marco Galardini (124666)
François Blanquart (3191950)

August 2023

VAG proportions of commensal and BSI strains are indicated between brackets. Significant differences...

Comparison of gene content in temperate Paenibacillus spp. and P. darwinianus strains by COG categories.

Melissa Dsouza (640377)
Michael W. Taylor (109094)
Susan J. Turner (640378)
Jackie Aislabie (640379)

October 2014

Comparison of gene content in temperate Paenibacillus spp. and P. darwinianus strai...

Genome features of SAGs and comparisons to their reference genome.

Philipp Engel (230434)
Ramunas Stepanauskas (170005)
Nancy A. Moran (12390)

September 2014

aS. alvi SAGs were compared to the reference genome of strain wkB2. G. apicola SAGs...

Strains by Comparative Genomic Analysis

Kittichotirat Weerayuth
Bumgarner Roger E.
Asikainen Sirkka
Chen Casey

July 2011

is genetically heterogeneous and comprises distinct clonal lineages that may have different virulen...

Summary of H. parasuis strains ZJ0906, SH0165 and 29755 genomes.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

Note: # denotes only draft genome was available for strain 29755; ˆ denotes percentage...

Comparative percentage of potential drug resistant genes.

Yufeng Li (259327)
Amy H. Y. Kwok (452726)
Jingwei Jiang (400897)
Yao Zou (452727)
Fangyuan Zheng (452728)
Pan Chen (385477)
Chengcai Hou (452729)
Frederick C. Leung (452730)
Ping Jiang (243020)

September 2013

ARDB-annotated gene distribution of H. parasuis serovar 12 strain ZJ0906, serovar 5 strain...

Distribution of KOG annotations and comparison of the core and non-core (variable) genome of (16 strains of) E. huxleyi.

Jessica U. Kegel (486782)
Uwe John (107371)
Klaus Valentin (139492)
Stephan Frickenhaus (139495)

November 2013

KOG annotations of the E. huxleyi genome strain CCMP1516 (JGI) were used to identify functional c...

Venn diagram of M. avium strains TH135 and 104 genomes and comparison of COG functional categories between strain TH135- and 104-specific genes.

Kei-ichi Uchiya (448546)
Hiroyasu Takahashi (448547)
Tetsuya Yagi (238496)
Makoto Moriyama (448548)
Takayuki Inagaki (448549)
Kazuya Ichikawa (448550)
Taku Nakagawa (448551)
Toshiaki Nikai (448552)
Kenji Ogawa (448553)

August 2013

(A) Venn diagram showing the distribution of shared orthologues and strain-specific genes between...

Comparison of gene contents and numbers with reference strain KCTC11537.

Seong-Won Nho (486432)
Jun-ichi Hikima (108293)
Seong Bin Park (108286)
Ho Bin Jang (108268)
In Seok Cha (108281)
Motoshige Yasuike (387948)
Yoji Nakamura (387944)
Atsushi Fujiwara (486433)
Motohiko Sano (134553)
Kinya Kanai (486434)
Hidehiro Kondo (216450)
Ikuo Hirono (216454)
Haruko Takeyama (295088)
Takashi Aoki (108299)
Tae-Sung Jung (486435)

November 2013

As assessed by RAST functional categories grouped among insertion/deletion genes, between the KRS...

Complete Genome Analysis of a Haemophilus parasuis

Serovar Strain From China
Yufeng Li
Amy H. Y. Kwok
Jingwei Jiang
Yao Zou
Fangyuan Zheng
Pan Chen
Chengcai Hou
Frederick C. Leung Ping

January 2013

Haemophilus parasuis is the etiological agent of Glässer’s disease in pigs and 15 standard serovars...

Comparison of COG distribution in the virulence genes with the B. melitensis 16 M genome COG distribution.

Aniel Jessica Leticia Brambila-Tapia (588553)
Dagoberto Armenta-Medina (588554)
Nancy Rivera-Gomez (588555)
Ernesto Perez-Rueda (3273120)

June 2014

P value obtained with chi-squared test and Fisher exact test,*p-value ≤0.05. Abbreviations...

A pairwise genic comparison of 12 NTHi strains of and the reference strain Rd KW20

Justin S Hogg (48102)
Fen Z Hu (34099)
Benjamin Janto (34106)
Robert Boissy (34109)
Jay Hayes (48103)
Randy Keefe (48104)
J Christopher Post (48105)
Garth D Ehrlich (34110)

December 2011

The comparison of two strains is found at the intersection of the row and column corresponding to th...

Comparison of COG-annotated genes between <i>H. parasuis</i> strains ZJ0906 and SH0165.

Abstract

Extracted data

Comparison of COG-annotated genes between <i>H. parasuis</i> strains ZJ0906 and SH0165.

Abstract

Extracted data

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