<p>Each node represents a different GO term, the size of the node relates to the level of enrichment of each term. Red in the centre of the node represents up-regulation in GM, red on the edge of the node represents up-regulation in WM. The connections between each GO term are either green or blue. A green connection between node means that the both GO terms are in the GM lists, blue connections represent appearance of the GO terms in the WM lists. The more closely related GO terms are, the closer they appear on the enrichment map. A large number of closely related GO terms forms a cluster. Each cluster has been labelled with a general terms that captures all GO terms.</p
<p>(a) Significant GO terms (FDR <i>P</i><0.05) over-represented among the up-regulated genes of the...
<p>Horizontal axis in the top displays the percentage of significant genes in each column, while axi...
<p>GO terms in bold are those significant terms after adjustment for multiple testing (Benjamini-Hoc...
<p>Each node represents one GO term. The thickness of the edges represents the number of genes share...
<p>Analogous to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0...
<p>(<b>A</b>) Molecular function and (<b>B</b>) biological process GO terms. Line plots represent th...
<p>The blue clusters represent the cellular component, the yellow clusters represent the biological ...
<p>Associated GO terms for molecular function are shown by nodes (circles) and related to one anothe...
Gene ontology (GO) clustering and selected significantly enriched GO terms of DMCs and DMR-associate...
<p>As in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0083109-...
<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...
<p>The GO terms are represented by circles, visualized in a semantic similarity-based scatter plot, ...
<p>The red nodes represent the target genes of the differentially expressed miRNAs, and the green no...
(A) GO terms of broadly expressed (EB) and narrowly expressed (EN) genes are shown for arabidopsis, ...
<p>(A) The union of human and mouse gene sets were analyzed using BiNGO software. Significantly enri...
<p>(a) Significant GO terms (FDR <i>P</i><0.05) over-represented among the up-regulated genes of the...
<p>Horizontal axis in the top displays the percentage of significant genes in each column, while axi...
<p>GO terms in bold are those significant terms after adjustment for multiple testing (Benjamini-Hoc...
<p>Each node represents one GO term. The thickness of the edges represents the number of genes share...
<p>Analogous to <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0...
<p>(<b>A</b>) Molecular function and (<b>B</b>) biological process GO terms. Line plots represent th...
<p>The blue clusters represent the cellular component, the yellow clusters represent the biological ...
<p>Associated GO terms for molecular function are shown by nodes (circles) and related to one anothe...
Gene ontology (GO) clustering and selected significantly enriched GO terms of DMCs and DMR-associate...
<p>As in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083109#pone-0083109-...
<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...
<p>The GO terms are represented by circles, visualized in a semantic similarity-based scatter plot, ...
<p>The red nodes represent the target genes of the differentially expressed miRNAs, and the green no...
(A) GO terms of broadly expressed (EB) and narrowly expressed (EN) genes are shown for arabidopsis, ...
<p>(A) The union of human and mouse gene sets were analyzed using BiNGO software. Significantly enri...
<p>(a) Significant GO terms (FDR <i>P</i><0.05) over-represented among the up-regulated genes of the...
<p>Horizontal axis in the top displays the percentage of significant genes in each column, while axi...
<p>GO terms in bold are those significant terms after adjustment for multiple testing (Benjamini-Hoc...