Radial phylogram constructed using SNPs and showing clustered samples.
- Taane G. Clark (106263)
- Kim Mallard (362508)
- Francesc Coll (495630)
- Mark Preston (489525)
- Samuel Assefa (495631)
- David Harris (758)
- Sam Ogwang (495632)
- Francis Mumbowa (227426)
- Bruce Kirenga (455274)
- Denise M. O’Sullivan (495633)
- Alphonse Okwera (227454)
- Kathleen D. Eisenach (227460)
- Moses Joloba (230166)
- Stephen D. Bentley (137281)
- Jerrold J. Ellner (227472)
- Julian Parkhill (30393)
- Edward C. Jones-López (227412)
- Ruth McNerney (227467)
Publication date
December 2013
DOIAbstract
<p>The best-scoring maximum likelihood phylogenetic tree was constructed using the set of 6,847 SNP sites. Support values computed from 100 bootstrap replicates provide assessment of confidence for each clade and are shown at the nodes of the tree. SNP variations within the clusters are summarised in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0083012#pone-0083012-t003" target="_blank">Table 3</a>. </p
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