<p>(A) Shown is the maximum z-score for each individual replicate for each cell line (left) and the z-score profile along the mitochondrial chromosome for the replicate with the highest z-score (right). Control datasets are shown in red on the bottom, below the red horizontal line; (B) Forward and reverse strand read distribution over the <i>C.elegans</i> mitochondrial genome for W03F9.2 (“Young Adult” stage). Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand are represented in yellow. The unique mappability track for the mitochondrial genome is shown in red in the outside track (see Methods for details). Plots generated using Circos version 0.60 <a href="http://www.plosone.org/article/info:do...
<p>Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand...
<p>Shown is the maximum signal (in RPM) for the top 10 nuclear peaks (“N”, smaller black dots), and ...
<p><b> and </b>. Both the exact and the approximated data were obtained with gem-mappability, the fo...
<p>Shown is the maximum z-score for each individual replicate for each cell line (left) and the z-sc...
<p>The maximum z-score for each individual TF ChIP-seq replicate in each cell line is shown on the l...
<p>The maximum z-score for each individual TF ChIP-seq replicate in each cell line is shown on the l...
<p>The maximum z-score for each individual TF ChIP-seq replicate in each cell line is shown on the l...
<p>Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand...
<p>Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand...
<p>Shown is the maximum z-score for each individual replicate for each cell line (left) and the z-sc...
<p>(A) Physical and transcriptional maps of the <i>Caenorhabditis elegans</i> mitochondrial genome, ...
<p>(A) human; (B) mouse; (C) <i>C. elegans</i>; (D) <i>D. melanogaster</i>. The 36 bp mappability tr...
<p>Distribution of read counts (in 10 bp bins) and depth of the mitochondrial genome from the MVZ 21...
<p>The fraction of reads mapping to the mitochondrial genome (chrM) is shown. (A,B) UW human (A) and...
<p>The top portion of the figure shows where the three amplicons lie and overlap across the mtgenome...
<p>Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand...
<p>Shown is the maximum signal (in RPM) for the top 10 nuclear peaks (“N”, smaller black dots), and ...
<p><b> and </b>. Both the exact and the approximated data were obtained with gem-mappability, the fo...
<p>Shown is the maximum z-score for each individual replicate for each cell line (left) and the z-sc...
<p>The maximum z-score for each individual TF ChIP-seq replicate in each cell line is shown on the l...
<p>The maximum z-score for each individual TF ChIP-seq replicate in each cell line is shown on the l...
<p>The maximum z-score for each individual TF ChIP-seq replicate in each cell line is shown on the l...
<p>Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand...
<p>Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand...
<p>Shown is the maximum z-score for each individual replicate for each cell line (left) and the z-sc...
<p>(A) Physical and transcriptional maps of the <i>Caenorhabditis elegans</i> mitochondrial genome, ...
<p>(A) human; (B) mouse; (C) <i>C. elegans</i>; (D) <i>D. melanogaster</i>. The 36 bp mappability tr...
<p>Distribution of read counts (in 10 bp bins) and depth of the mitochondrial genome from the MVZ 21...
<p>The fraction of reads mapping to the mitochondrial genome (chrM) is shown. (A,B) UW human (A) and...
<p>The top portion of the figure shows where the three amplicons lie and overlap across the mtgenome...
<p>Reads mapping to the forward strand are represented in black, reads mapping to the reverse strand...
<p>Shown is the maximum signal (in RPM) for the top 10 nuclear peaks (“N”, smaller black dots), and ...
<p><b> and </b>. Both the exact and the approximated data were obtained with gem-mappability, the fo...