<p>Phylogenetic neighbour joining tree of Rep_1 sequences from translated complete genes from putative plasmids (black) and Pfam seed sequences (green). Many diverging clades and sequences are seen, reflecting the diversity of replication proteins in the natural environment.</p
<p>The virome sequences from the Ogasawara (OG), Mariana (MA), and Shimokita (SH) libraries are high...
<p>The tree was constructed with 16S rRNA gene sequences from strain A6 (MG589453) and from other ba...
<p>The trees were constructed by the distance-based neighbor-joining algorithm using MEGA 5.2.2 soft...
<p>EC958_A0140 sequenced are labeled by plasmid name. Also shown is the replicon nomenclature for ea...
<p>Sequence names correspond to E3 protein sequences listed in <a href="http://www.plosone.org/artic...
Black line represents Eukarya domain, Green line represents Bacteria domain, Yellow line represents ...
<p>The rooted phylogenetic tree was calculated by the sequence distance method using the neighbor-jo...
<p>Maximum likelihood phylogeny derived by the full-protein sequences identified in both plants (gre...
<p>Genes encoding the enzymes are represented by arrows. The overall structure of the phylogenetic t...
<p>Neighbor-joining trees (1000 bootstrap replicates) presented are based on a multiple alignment of...
<p>The scale bar shows the number of amino acid substitutions per site. The colors of the tree branc...
Sequences in this study (green closed square) are named as mentioned in the main text. Sequences fro...
<p>Tree was obtained by the Neighbor-Joining method using only conserved regions. Bootstrap percenta...
<p>Neighbor-joining phylogenetic tree based on partial <i>g5</i> amino acid sequences (ca. 250 aa) s...
<p>The MSP1a sequences from tick-transmissible and non-transmissible strains (<a href="http://www.pl...
<p>The virome sequences from the Ogasawara (OG), Mariana (MA), and Shimokita (SH) libraries are high...
<p>The tree was constructed with 16S rRNA gene sequences from strain A6 (MG589453) and from other ba...
<p>The trees were constructed by the distance-based neighbor-joining algorithm using MEGA 5.2.2 soft...
<p>EC958_A0140 sequenced are labeled by plasmid name. Also shown is the replicon nomenclature for ea...
<p>Sequence names correspond to E3 protein sequences listed in <a href="http://www.plosone.org/artic...
Black line represents Eukarya domain, Green line represents Bacteria domain, Yellow line represents ...
<p>The rooted phylogenetic tree was calculated by the sequence distance method using the neighbor-jo...
<p>Maximum likelihood phylogeny derived by the full-protein sequences identified in both plants (gre...
<p>Genes encoding the enzymes are represented by arrows. The overall structure of the phylogenetic t...
<p>Neighbor-joining trees (1000 bootstrap replicates) presented are based on a multiple alignment of...
<p>The scale bar shows the number of amino acid substitutions per site. The colors of the tree branc...
Sequences in this study (green closed square) are named as mentioned in the main text. Sequences fro...
<p>Tree was obtained by the Neighbor-Joining method using only conserved regions. Bootstrap percenta...
<p>Neighbor-joining phylogenetic tree based on partial <i>g5</i> amino acid sequences (ca. 250 aa) s...
<p>The MSP1a sequences from tick-transmissible and non-transmissible strains (<a href="http://www.pl...
<p>The virome sequences from the Ogasawara (OG), Mariana (MA), and Shimokita (SH) libraries are high...
<p>The tree was constructed with 16S rRNA gene sequences from strain A6 (MG589453) and from other ba...
<p>The trees were constructed by the distance-based neighbor-joining algorithm using MEGA 5.2.2 soft...