<p>To identify the profile of false positives, sequencing coverage was plotted against the heterozygous read ratios using Sanger sequencing confirmed NGS variants. Green circle, Sanger confirmed variants. Red triangle, Sanger cleared false positive.</p
With the availability of next-generation sequencing (NGS) technology, it is expected that sequence v...
<p>FN: false negative result, extra: additional low allele frequency variants identified compared to...
<p>(A) A heterozygous substitution of G with A was confirmed in the <i>TET2</i> gene in sample S1-1....
<p>(A) Percentage of samples for which the coverage obtained falls within each 5% coverage window fo...
<p>(A) Table of showing counts, by allele, of all reads covering position 3850 counts. The non-PCR a...
Next-generation sequencing (NGS) has rapidly replaced Sanger sequencing as the method of choice for ...
<p>The seven out of 4,096 analyzed positions comprise four heterozygous SNPs as well as three homozy...
<p>(A) All isolates and loci from <a href="http://www.plosone.org/article/info:doi/10.1371/journal.p...
a<p>Represents percentage of variants that were detected by NGS but not confirmed by Sanger sequenci...
<p>Sensitivity of targeted next generation sequencing compared to current golden standard (automated...
<p>Two examples of heteroplasmic variants that were detected on the basis of mixed Ion Torrent reads...
<p>Of the filtered 41 candidates, 21 variants were confirmed by Sanger sequencing. Two examples are ...
<p>The distribution of heterozygosity of valid variants after genotyping by sequencing pipeline.</p
<p>Five cases with matched tumor—blood samples are shown. Annotations in black letters are given for...
<p>Both mutations are predicted by GATK, SomaticSNiPer and SAMtools. The mean coverage is 54 (true p...
With the availability of next-generation sequencing (NGS) technology, it is expected that sequence v...
<p>FN: false negative result, extra: additional low allele frequency variants identified compared to...
<p>(A) A heterozygous substitution of G with A was confirmed in the <i>TET2</i> gene in sample S1-1....
<p>(A) Percentage of samples for which the coverage obtained falls within each 5% coverage window fo...
<p>(A) Table of showing counts, by allele, of all reads covering position 3850 counts. The non-PCR a...
Next-generation sequencing (NGS) has rapidly replaced Sanger sequencing as the method of choice for ...
<p>The seven out of 4,096 analyzed positions comprise four heterozygous SNPs as well as three homozy...
<p>(A) All isolates and loci from <a href="http://www.plosone.org/article/info:doi/10.1371/journal.p...
a<p>Represents percentage of variants that were detected by NGS but not confirmed by Sanger sequenci...
<p>Sensitivity of targeted next generation sequencing compared to current golden standard (automated...
<p>Two examples of heteroplasmic variants that were detected on the basis of mixed Ion Torrent reads...
<p>Of the filtered 41 candidates, 21 variants were confirmed by Sanger sequencing. Two examples are ...
<p>The distribution of heterozygosity of valid variants after genotyping by sequencing pipeline.</p
<p>Five cases with matched tumor—blood samples are shown. Annotations in black letters are given for...
<p>Both mutations are predicted by GATK, SomaticSNiPer and SAMtools. The mean coverage is 54 (true p...
With the availability of next-generation sequencing (NGS) technology, it is expected that sequence v...
<p>FN: false negative result, extra: additional low allele frequency variants identified compared to...
<p>(A) A heterozygous substitution of G with A was confirmed in the <i>TET2</i> gene in sample S1-1....