Tissue distribution and connectivity structure of the 2,450 genes used to build the PRE- and POST-Puberty networks.

Gene co-expression networks constructed by combining results from RNA-Seq and GWAS with the knowledge of transcription regulators for pre-PRE (left panels) and post-pubertal (right panel) heifers.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Upper panels correspond to the visualization of the entire network comprising 2,450 nodes (or gen...

Network of direct and indirect gene connections between >2-fold downregulated genes.

Ioanna Sevastou (438645)
Gareth Pryce (468644)
David Baker (11642)
David L. Selwood (468649)

June 2016

Network of direct and indirect gene connections as predicted by Ingenuity Pathway Analysis softwa...

Analysis of the Gene Expression Patterns of the Human Immunome

ALI, HEIDI

June 2009

Abstract Background and aims: Genes and proteins involved in immune system are called immunome. A n...

Venn diagram of 2,450 genes used to construct gene networks.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Strategies used to construct gene networks involved genes that were (1) Differentially expressed ...

Sub-network created with highly co-expressed genes with significant hypothalamic and pituitary gland differential expression.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Triangles represent transcription factors. Color indicate connectivity degree from green (low con...

Gene Coexpression Network and Module Analysis across 52 Human Tissues

Binsheng He
Junlin Xu
Yingxiang Tian
Bo Liao
Jidong Lang
Huixin Lin
Xiaofei Mo
Qingqing Lu
Geng Tian
Pingping Bing

January 2020

Gene coexpression analysis is widely used to infer gene modules associated with diseases and other c...

Molecular network generated by Ingenuity software from the statistically significantly different expressed genes.

Sarah F. Janssen (135785)
Theo G. M. F. Gorgels (135788)
Koen Bossers (135792)
Jacoline B. ten Brink (135794)
Anke H. W. Essing (135797)
Martijn Nagtegaal (135800)
Peter J. van der Spek (135803)
Nomdo M. Jansonius (135805)
Arthur A. B. Bergen (135809)

September 2012

Molecular network generated from our microarray Significantly Different Expressed sub-dataset....

Hierarchical clusters from RNA-Seq data of 17,832 genes across 61 tissues.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Samples clustered first by tissue of origin and then by stage, PRE or POST-puberty. Abbreviations...

Disease genes and intracellular protein networks

January 2003

computational approach we reconstructed genomic transcrip-tional profiles of 19 different adult huma...

Network plot of prostate group and tissue enriched genes.

Gillian O'Hurley (779112)
Christer Busch (779113)
Linn Fagerberg (679443)
Björn M. Hallström (193784)
Charlotte Stadler (779114)
Anna Tolf (348917)
Emma Lundberg (114242)
Jochen M. Schwenk (489538)
Karin Jirström (133199)
Anders Bjartell (199682)
William M. Gallagher (265756)
Mathias Uhlén (2427553)
Fredrik Pontén (163908)

August 2015

Groups of expressed genes are represented as blue circle nodes and linked to the respective enric...

Title: DISEASE-GENES AND INTRACELLULAR PROTEIN NETWORKS

Bortoluzzi S
Romualdi C
Bisognin A
Danieli G. A
Contact Information

April 2008

Bortoluzzi et al. 2 By a computational approach we reconstructed genomic transcriptional profiles of...

The hierarchy of tissues which is used as the basis for learning networks for each tissue.

Emma Pierson (3552692)
Daphne Koller (47384)
Alexis Battle (434619)
Sara Mostafavi (51056)

May 2015

The hierarchy was created using hierarchical clustering: for each tissue, the mean expression of ...

Disease-genes and intracellular protein networks

Bortoluzzi, Stefania
Romualdi, Chiara
Bisognin, Andrea
Danieli, GIAN ANTONIO

January 2003

By a computational approach we reconstructed genomic transcriptional profiles of 19 different adult ...

Topological properties of genetic networks.

Cong Liu (66219)
Kyla Omilusik (13864191)
Clara Toma (13864194)
Nadia S. Kurd (13864197)
John T. Chang (13864200)
Ananda W. Goldrath (5479484)
Wei Wang (17594)

September 2022

(A) The number of edges (top) and nodes (bottom) in each genetic network. (B) The distribution of th...

Gene and splice junction distribution.

Matthew S. Hestand (439188)
Zheng Zeng (383660)
Stephen J. Coleman (439187)
Jinze Liu (383649)
James N. MacLeod (3286986)

January 2016

The percentage of genes or splice junctions found in the indicated number of tissues over a set t...

Gene co-expression networks constructed by combining results from RNA-Seq and GWAS with the knowledge of transcription regulators for pre-PRE (left panels) and post-pubertal (right panel) heifers.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Upper panels correspond to the visualization of the entire network comprising 2,450 nodes (or gen...

Network of direct and indirect gene connections between >2-fold downregulated genes.

Ioanna Sevastou (438645)
Gareth Pryce (468644)
David Baker (11642)
David L. Selwood (468649)

June 2016

Network of direct and indirect gene connections as predicted by Ingenuity Pathway Analysis softwa...

Analysis of the Gene Expression Patterns of the Human Immunome

ALI, HEIDI

June 2009

Abstract Background and aims: Genes and proteins involved in immune system are called immunome. A n...

Venn diagram of 2,450 genes used to construct gene networks.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Strategies used to construct gene networks involved genes that were (1) Differentially expressed ...

Sub-network created with highly co-expressed genes with significant hypothalamic and pituitary gland differential expression.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Triangles represent transcription factors. Color indicate connectivity degree from green (low con...

Gene Coexpression Network and Module Analysis across 52 Human Tissues

Binsheng He
Junlin Xu
Yingxiang Tian
Bo Liao
Jidong Lang
Huixin Lin
Xiaofei Mo
Qingqing Lu
Geng Tian
Pingping Bing

January 2020

Gene coexpression analysis is widely used to infer gene modules associated with diseases and other c...

Molecular network generated by Ingenuity software from the statistically significantly different expressed genes.

Sarah F. Janssen (135785)
Theo G. M. F. Gorgels (135788)
Koen Bossers (135792)
Jacoline B. ten Brink (135794)
Anke H. W. Essing (135797)
Martijn Nagtegaal (135800)
Peter J. van der Spek (135803)
Nomdo M. Jansonius (135805)
Arthur A. B. Bergen (135809)

September 2012

Molecular network generated from our microarray Significantly Different Expressed sub-dataset....

Hierarchical clusters from RNA-Seq data of 17,832 genes across 61 tissues.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Samples clustered first by tissue of origin and then by stage, PRE or POST-puberty. Abbreviations...

Disease genes and intracellular protein networks

January 2003

computational approach we reconstructed genomic transcrip-tional profiles of 19 different adult huma...

Network plot of prostate group and tissue enriched genes.

Gillian O'Hurley (779112)
Christer Busch (779113)
Linn Fagerberg (679443)
Björn M. Hallström (193784)
Charlotte Stadler (779114)
Anna Tolf (348917)
Emma Lundberg (114242)
Jochen M. Schwenk (489538)
Karin Jirström (133199)
Anders Bjartell (199682)
William M. Gallagher (265756)
Mathias Uhlén (2427553)
Fredrik Pontén (163908)

August 2015

Groups of expressed genes are represented as blue circle nodes and linked to the respective enric...

Title: DISEASE-GENES AND INTRACELLULAR PROTEIN NETWORKS

Bortoluzzi S
Romualdi C
Bisognin A
Danieli G. A
Contact Information

April 2008

Bortoluzzi et al. 2 By a computational approach we reconstructed genomic transcriptional profiles of...

The hierarchy of tissues which is used as the basis for learning networks for each tissue.

Emma Pierson (3552692)
Daphne Koller (47384)
Alexis Battle (434619)
Sara Mostafavi (51056)

May 2015

The hierarchy was created using hierarchical clustering: for each tissue, the mean expression of ...

Disease-genes and intracellular protein networks

Bortoluzzi, Stefania
Romualdi, Chiara
Bisognin, Andrea
Danieli, GIAN ANTONIO

January 2003

By a computational approach we reconstructed genomic transcriptional profiles of 19 different adult ...

Topological properties of genetic networks.

Cong Liu (66219)
Kyla Omilusik (13864191)
Clara Toma (13864194)
Nadia S. Kurd (13864197)
John T. Chang (13864200)
Ananda W. Goldrath (5479484)
Wei Wang (17594)

September 2022

(A) The number of edges (top) and nodes (bottom) in each genetic network. (B) The distribution of th...

Gene and splice junction distribution.

Matthew S. Hestand (439188)
Zheng Zeng (383660)
Stephen J. Coleman (439187)
Jinze Liu (383649)
James N. MacLeod (3286986)

January 2016

The percentage of genes or splice junctions found in the indicated number of tissues over a set t...

Gene co-expression networks constructed by combining results from RNA-Seq and GWAS with the knowledge of transcription regulators for pre-PRE (left panels) and post-pubertal (right panel) heifers.

Angela Cánovas (168984)
Antonio Reverter (61185)
Kasey L. DeAtley (601982)
Ryan L. Ashley (601983)
Michelle L. Colgrave (368112)
Marina R. S. Fortes (601984)
Alma Islas-Trejo (223522)
Sigrid Lehnert (601985)
Laercio Porto-Neto (601986)
Gonzalo Rincón (5659924)
Gail A. Silver (601987)
Warren M. Snelling (601988)
Juan F. Medrano (223531)
Milton G. Thomas (601989)

July 2014

Upper panels correspond to the visualization of the entire network comprising 2,450 nodes (or gen...

Network of direct and indirect gene connections between >2-fold downregulated genes.

Ioanna Sevastou (438645)
Gareth Pryce (468644)
David Baker (11642)
David L. Selwood (468649)

June 2016

Network of direct and indirect gene connections as predicted by Ingenuity Pathway Analysis softwa...

Analysis of the Gene Expression Patterns of the Human Immunome

ALI, HEIDI

June 2009

Abstract Background and aims: Genes and proteins involved in immune system are called immunome. A n...

Tissue distribution and connectivity structure of the 2,450 genes used to build the PRE- and POST-Puberty networks.

Abstract

Extracted data

Tissue distribution and connectivity structure of the 2,450 genes used to build the PRE- and POST-Puberty networks.

Abstract

Extracted data

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