<p>CR, control region domain I. Number of haplotypes (<i>h</i>), expected range, and Strobeck's S statistic; Haplotype diversity (<i>Hd</i>); Nucleotide diversity (<i>π</i>); Number of segregating sites (<i>S</i>); Ramos-Onsins & Rozas goodness of fit statistic (<i>R<sub>2</sub></i>) and probability calculated from coalescent simulations of null distribution; Tajima's D test of neutrality (<i>D</i>) and probability calculated from coalescent simulations of null distribution; Fu's test of neutrality (<i>Fs</i>) and probability calculated from coalescent simulations of null distribution. <i>Fs</i> is considered significant at P<0.02 <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0106267#pone.0106267-Simonsen1" target="_...
Natural selection, in the form of balancing selection or selective sweeps, can result in a decouplin...
Natural selection, in the form of balancing selection or selective sweeps, can result in a decouplin...
<p><i>N</i>, number of individuals sequenced; VS, variable sites; PIS, parsimony information sites; ...
†<p>: multiplied by 10<sup>−2</sup>;</p>‡<p>: not calculated because of lack of polymorphism;</p><p>...
a<p>length of analyzed resequenced region (in kb);</p>b<p>population;</p>c<p>number of segregating s...
<p>Length, total number of sites in alignment; Taxa, number of taxa; Length (no gaps), total number ...
<p>Note:</p>1<p> The number of chromosome; <sup>2</sup> Number of segregating sites; <sup>3</sup> Nu...
<p>Ha: number of haplotypes.</p><p>S: number of segregating sites.</p><p>π<sub>T</sub>: average numb...
<p><i>Tajima's D, and Fu and Li's D* and F* were calculated using the online Intrapop Neutrality Tes...
<p>Genetic diversity by locus (A) and by population (B). For both (A) and (B), bars indicate haploty...
A<p>Haplotypes identify unique strains.</p>B<p>Nucleotide diversity as the average proportion of nuc...
<p>N = n° of sequences; S = n° of polymorphic sites; H = n° of haplotypes; H<sub>d</sub> = haplotype...
<p>π, average number of nucleotide differences per site between two sequences; θ, Watterson estimato...
<p>The N is the number of sequences analyzed, h is the number of haplotypes, n is the number of the ...
<p><i>h</i>, number of different alleles across individuals; <i>S</i>, number of segregating sites; ...
Natural selection, in the form of balancing selection or selective sweeps, can result in a decouplin...
Natural selection, in the form of balancing selection or selective sweeps, can result in a decouplin...
<p><i>N</i>, number of individuals sequenced; VS, variable sites; PIS, parsimony information sites; ...
†<p>: multiplied by 10<sup>−2</sup>;</p>‡<p>: not calculated because of lack of polymorphism;</p><p>...
a<p>length of analyzed resequenced region (in kb);</p>b<p>population;</p>c<p>number of segregating s...
<p>Length, total number of sites in alignment; Taxa, number of taxa; Length (no gaps), total number ...
<p>Note:</p>1<p> The number of chromosome; <sup>2</sup> Number of segregating sites; <sup>3</sup> Nu...
<p>Ha: number of haplotypes.</p><p>S: number of segregating sites.</p><p>π<sub>T</sub>: average numb...
<p><i>Tajima's D, and Fu and Li's D* and F* were calculated using the online Intrapop Neutrality Tes...
<p>Genetic diversity by locus (A) and by population (B). For both (A) and (B), bars indicate haploty...
A<p>Haplotypes identify unique strains.</p>B<p>Nucleotide diversity as the average proportion of nuc...
<p>N = n° of sequences; S = n° of polymorphic sites; H = n° of haplotypes; H<sub>d</sub> = haplotype...
<p>π, average number of nucleotide differences per site between two sequences; θ, Watterson estimato...
<p>The N is the number of sequences analyzed, h is the number of haplotypes, n is the number of the ...
<p><i>h</i>, number of different alleles across individuals; <i>S</i>, number of segregating sites; ...
Natural selection, in the form of balancing selection or selective sweeps, can result in a decouplin...
Natural selection, in the form of balancing selection or selective sweeps, can result in a decouplin...
<p><i>N</i>, number of individuals sequenced; VS, variable sites; PIS, parsimony information sites; ...