Alignment of chimeric <i>bont</i> sequences in comparison with non-chimeric sequences.

<p>Chimeric sequences are aligned against non-chimeric sequences from type C strain C-Stockholm (lineage II) and type D strain 16868 (lineage I). The chimeric sequences are from type C/D strains BKT015925 and BKT75002, and type D/C strain DC5 (all from lineage I). In the H_N domain, nucleotides that are conserved are not colored, whereas unique nucleotides are marked in green, nucleotides corresponding to the C-sequence are marked in blue, and nucleotides corresponding to the D-sequence are in red. The light chain and the H_C domain are not represented according to scale and they are colored as the closest related sequence. Estimated recombination sites are indicated.