<p>The upper-left triangle depicting the contact map predicted by PconsC, and lower-right triangle by PconsC2. Grey dots indicate the real, observed contacts in PDB structures, while coloured ones depict the contacts predicted by respective methods. Here red represent wrong predictions and green correct ones. The values in the corners of the contact maps represent the fraction of correctly predicted contacts within the top long-range predictions.</p
Protein structures, usually visualized in various highly idealized forms focusing on the three-dimen...
Contact maps are plotted for all the histone-like protein dimers in this study: (A) H2A/H2B; (B) H3/...
Protein structures, usually visualized in various highly idealized forms focusing on the three-dimen...
H contact map real (red) and predicted (green) contacts are compared. In the bottom triangle a conta...
<p>The left panel shows the predicted contacts overlaid on the PDB structure <i>3fz1</i> (figure pro...
Ed on the native structure (RMSD = 2.3 Å) and by the contact map with depicted real and quite accura...
Plots (A-D) represent static and frequency contact maps for the major representative clusters of pro...
<p>Gray squares: contacts observed in crystal structure, Ovals: predicted contacts (green: correctly...
Is there any reason why we should predict contact maps (CMs)? The question is one of the several 'NP...
<p>Left figure: protein structure, with some of contacts uniquely predicted by gplmDCA marked by das...
Is there any reason why we should predict contact maps (CMs)? The question is one of the several 'NP...
1) The contacts are predicted by the deep learning method developed by Dr. Jinbo Xu. Each protein ha...
<p>The identities of the proteins for each plot are listed in <a href="http://www.plosone.org/articl...
Contact map selection is a crucial step in structure-based molecular dynamics modelling of proteins....
Abstract Contact sites between amino acids characterize im-portant structural features of a protein....
Protein structures, usually visualized in various highly idealized forms focusing on the three-dimen...
Contact maps are plotted for all the histone-like protein dimers in this study: (A) H2A/H2B; (B) H3/...
Protein structures, usually visualized in various highly idealized forms focusing on the three-dimen...
H contact map real (red) and predicted (green) contacts are compared. In the bottom triangle a conta...
<p>The left panel shows the predicted contacts overlaid on the PDB structure <i>3fz1</i> (figure pro...
Ed on the native structure (RMSD = 2.3 Å) and by the contact map with depicted real and quite accura...
Plots (A-D) represent static and frequency contact maps for the major representative clusters of pro...
<p>Gray squares: contacts observed in crystal structure, Ovals: predicted contacts (green: correctly...
Is there any reason why we should predict contact maps (CMs)? The question is one of the several 'NP...
<p>Left figure: protein structure, with some of contacts uniquely predicted by gplmDCA marked by das...
Is there any reason why we should predict contact maps (CMs)? The question is one of the several 'NP...
1) The contacts are predicted by the deep learning method developed by Dr. Jinbo Xu. Each protein ha...
<p>The identities of the proteins for each plot are listed in <a href="http://www.plosone.org/articl...
Contact map selection is a crucial step in structure-based molecular dynamics modelling of proteins....
Abstract Contact sites between amino acids characterize im-portant structural features of a protein....
Protein structures, usually visualized in various highly idealized forms focusing on the three-dimen...
Contact maps are plotted for all the histone-like protein dimers in this study: (A) H2A/H2B; (B) H3/...
Protein structures, usually visualized in various highly idealized forms focusing on the three-dimen...