<p>(A-B) fast (<i>k</i><sub>+</sub><i>c</i><sub>0</sub> = 20<i>s</i><sup>−1</sup>, <i>k</i><sub>−</sub> = 100<i>s</i><sup>−1</sup>, <i>γ</i> = 0.1<i>s</i><sup>−1</sup>, <i>α</i> = 100<i>s</i><sup>−1</sup>, <i>ζ</i> = 1) and (C-D) slow (<i>k</i><sub>+</sub><i>c</i><sub>0</sub> = 0.01<i>s</i><sup>−1</sup>, <i>k</i><sub>−</sub> = 0.05<i>s</i><sup>−1</sup>, <i>γ</i> = 1<i>s</i><sup>−1</sup>, <i>α</i> = 25<i>s</i><sup>−1</sup>, <i>ζ</i> = 500) switching. (A,C) Protein number as a function of time from Gillespie simulations for CM (blue lines) and BM (red lines). (B) The probability distribution for <i>n</i> target proteins is unimodal for both AM (blue) and FM (red). (D) The probability distribution is bimodal for AM (blue) and remains unimodal ...
<p>(<b>A</b>) Shown is the probability that no resistant cells are present at time <i>t</i>, conditi...
<p>The grey spreads illustrate the model output obtained using 50 random values of parameters from t...
Understanding the kinetic behavior of complex systems is crucial for the study of physical, chemical...
Thoughtful use of simplifying assumptions is crucial to make systems biology models tractable while ...
Thoughtful use of simplifying assumptions is crucial to make systems biology models tractable while ...
<p>We take the two stable fixed points in the deterministic dynamics as the starting and ending poin...
<p>Both models are simulated for 300 min, starting with <i>V</i> = 10 fL at <i>t</i> = 0. Initial co...
Random effect in cellular systems is an important topic in systems biology and often simu-lated with...
<p>Pathway steady states depicted as <b>Normal states</b> (<b>N</b>) as Normal Robust (<b>NR</b>) an...
<p>Pathway steady states depicted as <b>Normal states</b> (<b>N</b>) as Normal Robust (<b>NR</b>) an...
<p>The weight of the pathway net probability fluxes, obtained by <a href="http://www.ploscompbiol.or...
For LNK models for a set of eight cells, two parameters of the Off pathway were varied, the rate of ...
A. Linear–nonlinear–kinetic (LNK) model of an On-Off ganglion cell. Each of two pathways (Top, On pa...
<p>The average fraction of paired chromosomes, <i>p</i>, is plotted as a function of time, <i>t</i>,...
<p> </p><p></p><p></p><p></p><p><mi>J</mi><mn>0</mn></p><p><mi>E</mi><mi>E</mi></p><p></p><mo>=</mo>...
<p>(<b>A</b>) Shown is the probability that no resistant cells are present at time <i>t</i>, conditi...
<p>The grey spreads illustrate the model output obtained using 50 random values of parameters from t...
Understanding the kinetic behavior of complex systems is crucial for the study of physical, chemical...
Thoughtful use of simplifying assumptions is crucial to make systems biology models tractable while ...
Thoughtful use of simplifying assumptions is crucial to make systems biology models tractable while ...
<p>We take the two stable fixed points in the deterministic dynamics as the starting and ending poin...
<p>Both models are simulated for 300 min, starting with <i>V</i> = 10 fL at <i>t</i> = 0. Initial co...
Random effect in cellular systems is an important topic in systems biology and often simu-lated with...
<p>Pathway steady states depicted as <b>Normal states</b> (<b>N</b>) as Normal Robust (<b>NR</b>) an...
<p>Pathway steady states depicted as <b>Normal states</b> (<b>N</b>) as Normal Robust (<b>NR</b>) an...
<p>The weight of the pathway net probability fluxes, obtained by <a href="http://www.ploscompbiol.or...
For LNK models for a set of eight cells, two parameters of the Off pathway were varied, the rate of ...
A. Linear–nonlinear–kinetic (LNK) model of an On-Off ganglion cell. Each of two pathways (Top, On pa...
<p>The average fraction of paired chromosomes, <i>p</i>, is plotted as a function of time, <i>t</i>,...
<p> </p><p></p><p></p><p></p><p><mi>J</mi><mn>0</mn></p><p><mi>E</mi><mi>E</mi></p><p></p><mo>=</mo>...
<p>(<b>A</b>) Shown is the probability that no resistant cells are present at time <i>t</i>, conditi...
<p>The grey spreads illustrate the model output obtained using 50 random values of parameters from t...
Understanding the kinetic behavior of complex systems is crucial for the study of physical, chemical...