Additional file 1: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

The effect of gamma irradiation on astaxanthin synthetase encoding gene in two mutant strains of Phaffia rhodozyma

Ali-Reza Ahmadi
Naimeh Najafi

July 2013

The astaxanthin synthetase gene sequence of Phaffia rhodozyma in the NCBI Gene bank was used to desi...

Additional file 1: Figure S1. of The codon-optimized Δ6-desaturase gene of Pythium sp. as an empowering tool for engineering n3/n6 polyunsaturated fatty acid biosynthesis

Sukanya Jeennor (3571889)
Pattsarun Cheawchanlertfa (3571886)
Sarinya Suttiwattanakul (3571901)
Sarocha Panchanawaporn (3571892)
Chanikul Chutrakul (3571898)
Kobkul Laoteng (3571895)

September 2015

Comparison of deduced amino acid sequences between PyDes6 of Pythium sp. BCC53698 and other ∆6-desat...

MOESM7 of Regulation of carotenogenesis in the red yeast Xanthophyllomyces dendrorhous: the role of the transcriptional co-repressor complex Cyc8–Tup1 involved in catabolic repression

Pamela Córdova (3117375)
Jennifer Alcaíno (559618)
Natalia Bravo (3117369)
Salvador Barahona (3117387)
Dionisia Sepúlveda (559620)
María Fernández-Lobato (3117384)
Marcelo Baeza (559622)
Víctor Cifuentes (3117372)

November 2016

Additional file 7: Figure S3. Plasmids used for X. dendrorhous transformation. Up: pgCYC8-Hyg and pg...

Additional file 7: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S5. Growth (cell dry weight), astaxanthin concentration, and astaxanthin yield as a function ...

Additional file 5: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S4. Detection of the unknown carotenoid by 1H NMR (500 MHz) and 13C NMR (125 MHz) spectroscop...

Additional file 3: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S2. Standard curves for Î˛-actin (a), GAL4 DNA binding domain (DNA-BD) (b) and Estimated copy...

MOESM1 of Astaxanthin overproduction in yeast by strain engineering and new gene target uncovering

Jin Jin (342682)
Ying Wang (11406)
Mingdong Yao (3383978)
Xiaoli Gu (285928)
Bo Li (112195)
Hong Liu (50694)
Mingzhu Ding (5681864)
Wenhai Xiao (3495275)
Yingjin Yuan (473679)

August 2018

Additional file 1: Table S1. Plasmids used in this study. Table S2. Primers used in this study. Figu...

Cloning of the cytochrome p450 reductase (crtR) gene and its involvement in the astaxanthin biosynthesis of Xanthophyllomyces dendrorhous

Alcaíno, Jennifer
Barahona‑Crisóstomo, Salvador
Carmona, Marisela
Lozano, Carla
Marcoleta, Andrés
Niklitschek, Mauricio
Sepúlveda, Dionisia
Baeza Cancino, Marcelo
Cifuentes Guzmán, Víctor

October 2008

Background: The yeast Xanthophyllomyces dendrorhous synthesizes astaxanthin, a carotenoid with high ...

Additional file 6: of Identification of novel genes in the carotenogenic and oleaginous yeast Rhodotorula toruloides through genome-wide insertional mutagenesis

Yanbin Liu (231378)
Chong Koh (3493988)
Sihui Yap (3493991)
Minge Du (4874146)
Mya Hlaing (4874143)
Lianghui Ji (231384)

February 2018

Figure S3. T-DNA organizations in contructs used in this study. All binary vectors have the same pPZ...

Additional file 1: of Identification of novel genes in the carotenogenic and oleaginous yeast Rhodotorula toruloides through genome-wide insertional mutagenesis

Yanbin Liu (231378)
Chong Koh (3493988)
Sihui Yap (3493991)
Minge Du (4874146)
Mya Hlaing (4874143)
Lianghui Ji (231384)

February 2018

Figure S1. Optimization of transformation conditions. Unless indicated otherwise, the same volume (1...

Additional file 4: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S3. Detection of the unknown carotenoid by high resolution mass spectrometry. High resolution...

Additional file 2: Figure S2. of Functional characterization of thiolase-encoding genes from Xanthophyllomyces dendrorhous and their effects on carotenoid synthesis

Nicole Werner (2321296)
Melissa Gómez (3483224)
Marcelo Baeza (559622)
Víctor Cifuentes (3117372)
Jennifer Alcaíno (559618)

November 2016

Pathways involving genes studied in this work. A schematic representation of (A) Sterol and caroteno...

Genomic organization of the structural genes controlling the astaxanthin biosynthesis pathway of Xanthophyllomyces dendrorhous

Niklitschek, Mauricio
Alcaíno, Jennifer
Barahona‑Crisóstomo, Salvador
Sepúlveda, Dionisia
Lozano, Carla
Carmona, Marisela
Marcoleta, Andrés
Martínez, Claudio
Lodato, Patricia
Baeza Cancino, Marcelo
Cifuentes Guzmán, Víctor

May 2008

The cloning and nucleotide sequence of the genes (idi, crtE, crtYB, crtI and crtS) controlling the a...

Additional file 5: Figure S4. of Functional characterization of thiolase-encoding genes from Xanthophyllomyces dendrorhous and their effects on carotenoid synthesis

Nicole Werner (2321296)
Melissa Gómez (3483224)
Marcelo Baeza (559622)
Víctor Cifuentes (3117372)
Jennifer Alcaíno (559618)

November 2016

Scheme of plasmids constructed in this work. Schematic representation of plasmids used for yeast tra...

Additional file 1: Figure S1. of Several steps of lateral gene transfer followed by events of âbirth-and-deathâ evolution shaped a fungal sorbicillinoid biosynthetic gene cluster

Irina Druzhinina (3492278)
Eva Kubicek (3492284)
Christian Kubicek (3426419)

December 2016

Architecture of Trire2: 73618 and Trire2:73621. The bar specifies the size of the proteins (in amino...

The effect of gamma irradiation on astaxanthin synthetase encoding gene in two mutant strains of Phaffia rhodozyma

Ali-Reza Ahmadi
Naimeh Najafi

July 2013

The astaxanthin synthetase gene sequence of Phaffia rhodozyma in the NCBI Gene bank was used to desi...

Additional file 1: Figure S1. of The codon-optimized Δ6-desaturase gene of Pythium sp. as an empowering tool for engineering n3/n6 polyunsaturated fatty acid biosynthesis

Sukanya Jeennor (3571889)
Pattsarun Cheawchanlertfa (3571886)
Sarinya Suttiwattanakul (3571901)
Sarocha Panchanawaporn (3571892)
Chanikul Chutrakul (3571898)
Kobkul Laoteng (3571895)

September 2015

Comparison of deduced amino acid sequences between PyDes6 of Pythium sp. BCC53698 and other ∆6-desat...

MOESM7 of Regulation of carotenogenesis in the red yeast Xanthophyllomyces dendrorhous: the role of the transcriptional co-repressor complex Cyc8–Tup1 involved in catabolic repression

Pamela Córdova (3117375)
Jennifer Alcaíno (559618)
Natalia Bravo (3117369)
Salvador Barahona (3117387)
Dionisia Sepúlveda (559620)
María Fernández-Lobato (3117384)
Marcelo Baeza (559622)
Víctor Cifuentes (3117372)

November 2016

Additional file 7: Figure S3. Plasmids used for X. dendrorhous transformation. Up: pgCYC8-Hyg and pg...

Additional file 7: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S5. Growth (cell dry weight), astaxanthin concentration, and astaxanthin yield as a function ...

Additional file 5: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S4. Detection of the unknown carotenoid by 1H NMR (500 MHz) and 13C NMR (125 MHz) spectroscop...

Additional file 3: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S2. Standard curves for Î˛-actin (a), GAL4 DNA binding domain (DNA-BD) (b) and Estimated copy...

MOESM1 of Astaxanthin overproduction in yeast by strain engineering and new gene target uncovering

Jin Jin (342682)
Ying Wang (11406)
Mingdong Yao (3383978)
Xiaoli Gu (285928)
Bo Li (112195)
Hong Liu (50694)
Mingzhu Ding (5681864)
Wenhai Xiao (3495275)
Yingjin Yuan (473679)

August 2018

Additional file 1: Table S1. Plasmids used in this study. Table S2. Primers used in this study. Figu...

Cloning of the cytochrome p450 reductase (crtR) gene and its involvement in the astaxanthin biosynthesis of Xanthophyllomyces dendrorhous

Alcaíno, Jennifer
Barahona‑Crisóstomo, Salvador
Carmona, Marisela
Lozano, Carla
Marcoleta, Andrés
Niklitschek, Mauricio
Sepúlveda, Dionisia
Baeza Cancino, Marcelo
Cifuentes Guzmán, Víctor

October 2008

Background: The yeast Xanthophyllomyces dendrorhous synthesizes astaxanthin, a carotenoid with high ...

Additional file 6: of Identification of novel genes in the carotenogenic and oleaginous yeast Rhodotorula toruloides through genome-wide insertional mutagenesis

Yanbin Liu (231378)
Chong Koh (3493988)
Sihui Yap (3493991)
Minge Du (4874146)
Mya Hlaing (4874143)
Lianghui Ji (231384)

February 2018

Figure S3. T-DNA organizations in contructs used in this study. All binary vectors have the same pPZ...

Additional file 1: of Identification of novel genes in the carotenogenic and oleaginous yeast Rhodotorula toruloides through genome-wide insertional mutagenesis

Yanbin Liu (231378)
Chong Koh (3493988)
Sihui Yap (3493991)
Minge Du (4874146)
Mya Hlaing (4874143)
Lianghui Ji (231384)

February 2018

Figure S1. Optimization of transformation conditions. Unless indicated otherwise, the same volume (1...

Additional file 4: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Shuang Chi (3501158)
Yanfeng He (2902363)
Jie Ren (176083)
Qian Su (3112242)
Xingchao Liu (3501161)
Zhi Chen (222749)
Mingan Wang (691918)
Ying Li (38224)
Jilun Li (445079)

June 2015

Figure S3. Detection of the unknown carotenoid by high resolution mass spectrometry. High resolution...

Additional file 2: Figure S2. of Functional characterization of thiolase-encoding genes from Xanthophyllomyces dendrorhous and their effects on carotenoid synthesis

Nicole Werner (2321296)
Melissa Gómez (3483224)
Marcelo Baeza (559622)
Víctor Cifuentes (3117372)
Jennifer Alcaíno (559618)

November 2016

Pathways involving genes studied in this work. A schematic representation of (A) Sterol and caroteno...

Genomic organization of the structural genes controlling the astaxanthin biosynthesis pathway of Xanthophyllomyces dendrorhous

Niklitschek, Mauricio
Alcaíno, Jennifer
Barahona‑Crisóstomo, Salvador
Sepúlveda, Dionisia
Lozano, Carla
Carmona, Marisela
Marcoleta, Andrés
Martínez, Claudio
Lodato, Patricia
Baeza Cancino, Marcelo
Cifuentes Guzmán, Víctor

May 2008

The cloning and nucleotide sequence of the genes (idi, crtE, crtYB, crtI and crtS) controlling the a...

Additional file 5: Figure S4. of Functional characterization of thiolase-encoding genes from Xanthophyllomyces dendrorhous and their effects on carotenoid synthesis

Nicole Werner (2321296)
Melissa Gómez (3483224)
Marcelo Baeza (559622)
Víctor Cifuentes (3117372)
Jennifer Alcaíno (559618)

November 2016

Scheme of plasmids constructed in this work. Schematic representation of plasmids used for yeast tra...

Additional file 1: Figure S1. of Several steps of lateral gene transfer followed by events of âbirth-and-deathâ evolution shaped a fungal sorbicillinoid biosynthetic gene cluster

Irina Druzhinina (3492278)
Eva Kubicek (3492284)
Christian Kubicek (3426419)

December 2016

Architecture of Trire2: 73618 and Trire2:73621. The bar specifies the size of the proteins (in amino...

The effect of gamma irradiation on astaxanthin synthetase encoding gene in two mutant strains of Phaffia rhodozyma

Ali-Reza Ahmadi
Naimeh Najafi

July 2013

The astaxanthin synthetase gene sequence of Phaffia rhodozyma in the NCBI Gene bank was used to desi...

Additional file 1: Figure S1. of The codon-optimized Δ6-desaturase gene of Pythium sp. as an empowering tool for engineering n3/n6 polyunsaturated fatty acid biosynthesis

Sukanya Jeennor (3571889)
Pattsarun Cheawchanlertfa (3571886)
Sarinya Suttiwattanakul (3571901)
Sarocha Panchanawaporn (3571892)
Chanikul Chutrakul (3571898)
Kobkul Laoteng (3571895)

September 2015

Comparison of deduced amino acid sequences between PyDes6 of Pythium sp. BCC53698 and other ∆6-desat...

MOESM7 of Regulation of carotenogenesis in the red yeast Xanthophyllomyces dendrorhous: the role of the transcriptional co-repressor complex Cyc8–Tup1 involved in catabolic repression

Pamela Córdova (3117375)
Jennifer Alcaíno (559618)
Natalia Bravo (3117369)
Salvador Barahona (3117387)
Dionisia Sepúlveda (559620)
María Fernández-Lobato (3117384)
Marcelo Baeza (559622)
Víctor Cifuentes (3117372)

November 2016

Additional file 7: Figure S3. Plasmids used for X. dendrorhous transformation. Up: pgCYC8-Hyg and pg...

Additional file 1: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Abstract

Extracted data

Additional file 1: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma

Abstract

Extracted data

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