Networks of human disease pathway genes, showing one disease for each of three classes: (a) male infertility for GS leading class, (b) retinoblastoma for NB leading class, and (c) cystic fibrosis for GS overtaking class.

The combined network in the neighborhood of a human disease.

U. Martin Singh-Blom (409115)
Nagarajan Natarajan (409116)
Ambuj Tewari (409117)
John O. Woods (409118)
Inderjit S. Dhillon (409119)
Edward M. Marcotte (50526)

May 2013

The local network around the human disease diabetes insipidus and two genes highly ranked by Cata...

Ingenuity Pathway Analysis network depicting relationships among cancer related genes expressed differently in LNCap (3A) or DU145 (3B) cells.

Ryuhei Kanaoka (748917)
Akifumi Kushiyama (748918)
Yasuyuki Seno (748919)
Yusuke Nakatsu (748920)
Yasuka Matsunaga (748921)
Toshiaki Fukushima (748922)
Yoshihiro Tsuchiya (748923)
Hideyuki Sakoda (642049)
Midori Fujishiro (514010)
Takeshi Yamamotoya (748924)
Hideaki Kamata (748925)
Akio Matsubara (444548)
Tomoichiro Asano (330080)

June 2015

Intensity of the red color indicates the degree of upregulation. Intensity of the green color ind...

Analysis of the robustness of network-based disease-gene prioritization methods reveals redundancy in the human interactome and functional diversity of disease-genes.

Emre Guney
Baldo Oliva

Complex biological systems usually pose a trade-off between robustness and fragility where a small n...

(a) Three hypothetical pathways with different degrees of connectivity.

Jung Eun Shim (757536)
Sohyun Hwang (224656)
Insuk Lee (41276)

June 2015

Black nodes represent pathway genes and white nodes represent all other genes of the network. The...

Gene-disease heterogeneous network.

Song-Yao Zhang (3708619)
Shao-Wu Zhang (2901425)
Xiao-Nan Fan (6204878)
Jia Meng (306948)
Yidong Chen (11610)
Shou-Jiang Gao (107475)
Yufei Huang (195878)

January 2019

The top network is gene-gene interaction network, the bottom network is disease-disease similarity n...

Hierarchical clustering of human disease and environmental information processing pathways in respect to the SRV+ genes that are shared between the pathways.

Slavica Dimitrieva (572392)
Maria Anisimova (35502)

June 2014

The bars next to the pathways denote the number of SRV+ genes (red) and SRV- genes (green) in the...

The detailed interaction information of known and candidate disease genes in the KEGG pathway of hematopoietic cell lineage.

Liangcai Zhang (156659)
Xu Li (23864)
Jingxie Tai (156661)
Wan Li (156663)
Lina Chen (87129)

June 2012

Blue nodes represent candidate disease genes, and the yellow ones represent known disease genes.<...

Gene-Disease Network Analysis Reveals Functional Modules in Mendelian, Complex and Environmental Diseases

Anna Bauer-mehren
Markus Bundschus
Michael Rautschka
Miguel A. Mayer
Ferran Sanz
Laura I

October 2015

Background: Scientists have been trying to understand the molecular mechanisms of diseases to design...

Gene interaction network and pathway interaction network analyses.

Zhong-Hao Ji (4336486)
Jian Chen (15340)
Wei Gao (2085)
Jin-Yu Zhang (4336489)
Fu-Shi Quan (329010)
Jin-Ping Hu (3138867)
Bao Yuan (585607)
Wen-Zhi Ren (4336492)

August 2017

A: For genes that are associated with human diseases and immune pathways, larger dots correspond ...

Pathway Network Analysis of Complex Diseases Based on Multiple Biological Networks

Fang Zheng
Le Wei
Liang Zhao
FuChuan Ni

January 2018

Biological pathways play important roles in the development of complex diseases, such as cancers, wh...

Network analysis of genes and their association with diseases

Pavlopoulou, ATHANASIA
Bagos, Pantelis G.
Pavlopoulos, Georgios A.
Dimou, Niki L.
Kontou, Panagiota I.

September 2016

A plethora of network-based approaches within the Systems Biology universe have been applied, to dat...

Diseases associated with the genes in the differential network of each breast cell state.

Ankur P. Parikh (604003)
Ross E. Curtis (574088)
Irene Kuhn (377460)
Sabine Becker-Weimann (604004)
Mina Bissell (604005)
Eric P. Xing (92330)
Wei Wu (27708)

July 2014

(A) S1; (B) T4; (C) the EGFR/ITGB1-T4R group; (D) the PI3K/MAPKK-T4R group; and (E) the MMP-T4R g...

The four candidate genes for ovarian cancer and their neighbor genes in the condition specific network.

Bayarbaatar Amgalan (620181)
Hyunju Lee (51046)

August 2014

The four candidate ovarian cancer-related genes are colored in red, ovarian cancer-related genes ...

Mapping essential and nonessential disease genes to the Human Disease Network (HDN).

Seong Kyu Han (209623)
Inhae Kim (184678)
Jihye Hwang (184689)
Sanguk Kim (88632)

August 2015

(a) The modular architecture of human diseases and their gene essentiality in the HDN. (b) The HD...

Cellular networks of candidate genes.

Katherine W. Jordan (159207)
Kyle L. Craver (159209)
Michael M. Magwire (109925)
Carmen E. Cubilla (159212)
Trudy F. C. Mackay (120308)
Robert R. H. Anholt (159214)

June 2012

(A) Enriched cellular genetic pathway for candidate genes from all genome wide association analys...

The combined network in the neighborhood of a human disease.

U. Martin Singh-Blom (409115)
Nagarajan Natarajan (409116)
Ambuj Tewari (409117)
John O. Woods (409118)
Inderjit S. Dhillon (409119)
Edward M. Marcotte (50526)

May 2013

The local network around the human disease diabetes insipidus and two genes highly ranked by Cata...

Ingenuity Pathway Analysis network depicting relationships among cancer related genes expressed differently in LNCap (3A) or DU145 (3B) cells.

Ryuhei Kanaoka (748917)
Akifumi Kushiyama (748918)
Yasuyuki Seno (748919)
Yusuke Nakatsu (748920)
Yasuka Matsunaga (748921)
Toshiaki Fukushima (748922)
Yoshihiro Tsuchiya (748923)
Hideyuki Sakoda (642049)
Midori Fujishiro (514010)
Takeshi Yamamotoya (748924)
Hideaki Kamata (748925)
Akio Matsubara (444548)
Tomoichiro Asano (330080)

June 2015

Intensity of the red color indicates the degree of upregulation. Intensity of the green color ind...

Analysis of the robustness of network-based disease-gene prioritization methods reveals redundancy in the human interactome and functional diversity of disease-genes.

Emre Guney
Baldo Oliva

Complex biological systems usually pose a trade-off between robustness and fragility where a small n...

(a) Three hypothetical pathways with different degrees of connectivity.

Jung Eun Shim (757536)
Sohyun Hwang (224656)
Insuk Lee (41276)

June 2015

Black nodes represent pathway genes and white nodes represent all other genes of the network. The...

Gene-disease heterogeneous network.

Song-Yao Zhang (3708619)
Shao-Wu Zhang (2901425)
Xiao-Nan Fan (6204878)
Jia Meng (306948)
Yidong Chen (11610)
Shou-Jiang Gao (107475)
Yufei Huang (195878)

January 2019

The top network is gene-gene interaction network, the bottom network is disease-disease similarity n...

Hierarchical clustering of human disease and environmental information processing pathways in respect to the SRV+ genes that are shared between the pathways.

Slavica Dimitrieva (572392)
Maria Anisimova (35502)

June 2014

The bars next to the pathways denote the number of SRV+ genes (red) and SRV- genes (green) in the...

The detailed interaction information of known and candidate disease genes in the KEGG pathway of hematopoietic cell lineage.

Liangcai Zhang (156659)
Xu Li (23864)
Jingxie Tai (156661)
Wan Li (156663)
Lina Chen (87129)

June 2012

Blue nodes represent candidate disease genes, and the yellow ones represent known disease genes.<...

Gene-Disease Network Analysis Reveals Functional Modules in Mendelian, Complex and Environmental Diseases

Anna Bauer-mehren
Markus Bundschus
Michael Rautschka
Miguel A. Mayer
Ferran Sanz
Laura I

October 2015

Background: Scientists have been trying to understand the molecular mechanisms of diseases to design...

Gene interaction network and pathway interaction network analyses.

Zhong-Hao Ji (4336486)
Jian Chen (15340)
Wei Gao (2085)
Jin-Yu Zhang (4336489)
Fu-Shi Quan (329010)
Jin-Ping Hu (3138867)
Bao Yuan (585607)
Wen-Zhi Ren (4336492)

August 2017

A: For genes that are associated with human diseases and immune pathways, larger dots correspond ...

Pathway Network Analysis of Complex Diseases Based on Multiple Biological Networks

Fang Zheng
Le Wei
Liang Zhao
FuChuan Ni

January 2018

Biological pathways play important roles in the development of complex diseases, such as cancers, wh...

Network analysis of genes and their association with diseases

Pavlopoulou, ATHANASIA
Bagos, Pantelis G.
Pavlopoulos, Georgios A.
Dimou, Niki L.
Kontou, Panagiota I.

September 2016

A plethora of network-based approaches within the Systems Biology universe have been applied, to dat...

Diseases associated with the genes in the differential network of each breast cell state.

Ankur P. Parikh (604003)
Ross E. Curtis (574088)
Irene Kuhn (377460)
Sabine Becker-Weimann (604004)
Mina Bissell (604005)
Eric P. Xing (92330)
Wei Wu (27708)

July 2014

(A) S1; (B) T4; (C) the EGFR/ITGB1-T4R group; (D) the PI3K/MAPKK-T4R group; and (E) the MMP-T4R g...

The four candidate genes for ovarian cancer and their neighbor genes in the condition specific network.

Bayarbaatar Amgalan (620181)
Hyunju Lee (51046)

August 2014

The four candidate ovarian cancer-related genes are colored in red, ovarian cancer-related genes ...

Mapping essential and nonessential disease genes to the Human Disease Network (HDN).

Seong Kyu Han (209623)
Inhae Kim (184678)
Jihye Hwang (184689)
Sanguk Kim (88632)

August 2015

(a) The modular architecture of human diseases and their gene essentiality in the HDN. (b) The HD...

Cellular networks of candidate genes.

Katherine W. Jordan (159207)
Kyle L. Craver (159209)
Michael M. Magwire (109925)
Carmen E. Cubilla (159212)
Trudy F. C. Mackay (120308)
Robert R. H. Anholt (159214)

June 2012

(A) Enriched cellular genetic pathway for candidate genes from all genome wide association analys...

The combined network in the neighborhood of a human disease.

U. Martin Singh-Blom (409115)
Nagarajan Natarajan (409116)
Ambuj Tewari (409117)
John O. Woods (409118)
Inderjit S. Dhillon (409119)
Edward M. Marcotte (50526)

May 2013

The local network around the human disease diabetes insipidus and two genes highly ranked by Cata...

Ingenuity Pathway Analysis network depicting relationships among cancer related genes expressed differently in LNCap (3A) or DU145 (3B) cells.

Ryuhei Kanaoka (748917)
Akifumi Kushiyama (748918)
Yasuyuki Seno (748919)
Yusuke Nakatsu (748920)
Yasuka Matsunaga (748921)
Toshiaki Fukushima (748922)
Yoshihiro Tsuchiya (748923)
Hideyuki Sakoda (642049)
Midori Fujishiro (514010)
Takeshi Yamamotoya (748924)
Hideaki Kamata (748925)
Akio Matsubara (444548)
Tomoichiro Asano (330080)

June 2015

Intensity of the red color indicates the degree of upregulation. Intensity of the green color ind...

Analysis of the robustness of network-based disease-gene prioritization methods reveals redundancy in the human interactome and functional diversity of disease-genes.

Emre Guney
Baldo Oliva

Complex biological systems usually pose a trade-off between robustness and fragility where a small n...

Networks of human disease pathway genes, showing one disease for each of three classes: (a) male infertility for GS leading class, (b) retinoblastoma for NB leading class, and (c) cystic fibrosis for GS overtaking class.

Abstract

Extracted data

Networks of human disease pathway genes, showing one disease for each of three classes: (a) male infertility for GS leading class, (b) retinoblastoma for NB leading class, and (c) cystic fibrosis for GS overtaking class.

Abstract

Extracted data

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