Statistics of proteins, PPIs, essential proteins, and proteins annotated by 11 labeled compartments in the global PIN of each species.

Annotation statistics for unigenes.

Zongying Zhang (391965)
Shenghui Jiang (775100)
Nan Wang (21935)
Min Li (12799)
Xiaohao Ji (391966)
Shasha Sun (775101)
Jingxuan Liu (278357)
Deyun Wang (517505)
Haifeng Xu (481507)
Sumin Qi (840628)
Shujing Wu (391970)
Zhangjun Fei (14143)
Shouqian Feng (391972)
Xuesen Chen (391973)

December 2015

Unigenes annotated as known proteins with E-value threshold 9E−6. Total numbers of uni...

Power-law distribution of protein lengths.

Leslie Hatton (738144)
Gregory Warr (738145)

May 2015

A The emergence of the protein length distribution with randomly increasing subsets of data from ...

Statistics of the proteins in the protein interaction network constructed based on the i2d database.

Shunyao Wu (692720)
Fengjing Shao (692721)
Jun Ji (82053)
Rencheng Sun (692722)
Rizhuang Dong (692723)
Yuanke Zhou (692724)
Shaojie Xu (692725)
Yi Sui (118031)
Jianlong Hu (692726)

February 2015

Statistics of the proteins in the protein interaction network constructed based on the i2d databa...

This table shows, for a few different organisms, the total number of proteins for which predictions were made and the relative fractions of the four basic protein types.

Sheila M. Reynolds (245934)
Lukas Käll (338478)
Michael E. Riffle (375924)
Jeff A. Bilmes (245938)
William Stafford Noble (25740)

February 2013

This table shows, for a few different organisms, the total number of proteins for which predictio...

The statistics of pupylated proteins and their pupylation sites used in this study.

Md. Mehedi Hasan (755447)
Yuan Zhou (179597)
Xiaotian Lu (755448)
Jinyan Li (24722)
Jiangning Song (59322)
Ziding Zhang (145526)

June 2015

Values in parentheses represent the number of sites used in this study.The statistics of p...

Distribution of identified proteins based on their peptide counts.

Shihai Xing (140916)
Xiaoxi Meng (3592370)
Lihui Zhou (1504444)
Hana Mujahid (386479)
Chunfang Zhao (247221)
Yadong Zhang (13685)
Cailin Wang (3592367)
Zhaohua Peng (202922)

December 2016

A: Protein peptide count numbers vs numbers of proteins. The proteins identified with the same pe...

The distribution of proteins and essential proteins in the different PSLINs of four species.

Xiaoqing Peng (761384)
Jianxin Wang (35827)
Jun Wang (5906)
Fang-Xiang Wu (39390)
Yi Pan (68170)

June 2015

Subcellular localizations (Compartments) are used to denote different PSLINs. #P and #E...

Statistics of the IsoBase database.

Sayed Mohammad Ebrahim Sahraeian (142309)
Byung-Jun Yoon (142313)

August 2012

For each organism, the following numbers are shown: number of proteins in the network, number of ...

The summary of dataset.

Pufeng Du (23920)
Lusheng Wang (513360)

January 2014

(A) The number of locative proteins in different subcellular locations. There are 6951 proteins w...

The number of proteins of interest and DPs in the protein repertoires from maize inbred lines M9 and SM9 under different photoperiods.

You-Zhi Li (3918554)
Xian-Wei Fan (3918551)
Qiang Chen (114038)
Hao Zhong (1756825)

April 2017

The statistics were based on manual searching from GO categorization instead of simple annotation...

Normalized protein abundance within each of the three proteome fractions, by phylogenetic bins.

Patrik D'haeseleer (101469)
John M. Gladden (162494)
Martin Allgaier (222799)
Patrik S. G. Chain (435193)
Susannah G. Tringe (43680)
Stephanie A. Malfatti (124718)
Joshua T. Aldrich (435194)
Carrie D. Nicora (230020)
Errol W. Robinson (328862)
Ljiljana Pasa-Tolic (154807)
Philip Hugenholtz (13833)
Blake A. Simmons (108789)
Steven W. Singer (162486)

July 2013

Normalized protein abundance within each of the three proteome fractions, by phylogenetic bins.</...

Unique amino acid distribution and average protein length.

Leslie Hatton (738144)
Gregory Warr (738145)

May 2015

A Cumulative distribution function of unique amino acid count occurrence in proteins. The analysi...

Comparison of (A) average protein length, the frequency of (B) PPP and of (C) PPG in the total proteome and in orthologous protein pools.

Ajeet Mandal (653939)
Swati Mandal (203916)
Myung Hee Park (176990)

November 2014

The orthologous protein pools were generated from each species: pool 1, those shared by all five ...

Distribution of cell cycle dependent proteins with changes in level and localization.

Shlomit Farkash-Amar (121750)
Eran Eden (121752)
Ariel Cohen (121753)
Naama Geva-Zatorsky (22491)
Lydia Cohen (121756)
Ron Milo (22493)
Alex Sigal (22494)
Tamar Danon (121758)
Uri Alon (15569)

November 2012

The number of proteins that were found to be cell cycle dependent in each of the tested categorie...

The statistics of the subcellular localizations and the numbers of interactions.

Motonori Ota (3064)
Hideki Gonja (2826827)
Ryotaro Koike (118247)
Satoshi Fukuchi (2976)

June 2016

A. The number of proteins (observations) in each subcellular localization and the average number ...

Annotation statistics for unigenes.

Zongying Zhang (391965)
Shenghui Jiang (775100)
Nan Wang (21935)
Min Li (12799)
Xiaohao Ji (391966)
Shasha Sun (775101)
Jingxuan Liu (278357)
Deyun Wang (517505)
Haifeng Xu (481507)
Sumin Qi (840628)
Shujing Wu (391970)
Zhangjun Fei (14143)
Shouqian Feng (391972)
Xuesen Chen (391973)

December 2015

Unigenes annotated as known proteins with E-value threshold 9E−6. Total numbers of uni...

Power-law distribution of protein lengths.

Leslie Hatton (738144)
Gregory Warr (738145)

May 2015

A The emergence of the protein length distribution with randomly increasing subsets of data from ...

Statistics of the proteins in the protein interaction network constructed based on the i2d database.

Shunyao Wu (692720)
Fengjing Shao (692721)
Jun Ji (82053)
Rencheng Sun (692722)
Rizhuang Dong (692723)
Yuanke Zhou (692724)
Shaojie Xu (692725)
Yi Sui (118031)
Jianlong Hu (692726)

February 2015

Statistics of the proteins in the protein interaction network constructed based on the i2d databa...

This table shows, for a few different organisms, the total number of proteins for which predictions were made and the relative fractions of the four basic protein types.

Sheila M. Reynolds (245934)
Lukas Käll (338478)
Michael E. Riffle (375924)
Jeff A. Bilmes (245938)
William Stafford Noble (25740)

February 2013

This table shows, for a few different organisms, the total number of proteins for which predictio...

The statistics of pupylated proteins and their pupylation sites used in this study.

Md. Mehedi Hasan (755447)
Yuan Zhou (179597)
Xiaotian Lu (755448)
Jinyan Li (24722)
Jiangning Song (59322)
Ziding Zhang (145526)

June 2015

Values in parentheses represent the number of sites used in this study.The statistics of p...

Distribution of identified proteins based on their peptide counts.

Shihai Xing (140916)
Xiaoxi Meng (3592370)
Lihui Zhou (1504444)
Hana Mujahid (386479)
Chunfang Zhao (247221)
Yadong Zhang (13685)
Cailin Wang (3592367)
Zhaohua Peng (202922)

December 2016

A: Protein peptide count numbers vs numbers of proteins. The proteins identified with the same pe...

The distribution of proteins and essential proteins in the different PSLINs of four species.

Xiaoqing Peng (761384)
Jianxin Wang (35827)
Jun Wang (5906)
Fang-Xiang Wu (39390)
Yi Pan (68170)

June 2015

Subcellular localizations (Compartments) are used to denote different PSLINs. #P and #E...

Statistics of the IsoBase database.

Sayed Mohammad Ebrahim Sahraeian (142309)
Byung-Jun Yoon (142313)

August 2012

For each organism, the following numbers are shown: number of proteins in the network, number of ...

The summary of dataset.

Pufeng Du (23920)
Lusheng Wang (513360)

January 2014

(A) The number of locative proteins in different subcellular locations. There are 6951 proteins w...

The number of proteins of interest and DPs in the protein repertoires from maize inbred lines M9 and SM9 under different photoperiods.

You-Zhi Li (3918554)
Xian-Wei Fan (3918551)
Qiang Chen (114038)
Hao Zhong (1756825)

April 2017

The statistics were based on manual searching from GO categorization instead of simple annotation...

Normalized protein abundance within each of the three proteome fractions, by phylogenetic bins.

Patrik D'haeseleer (101469)
John M. Gladden (162494)
Martin Allgaier (222799)
Patrik S. G. Chain (435193)
Susannah G. Tringe (43680)
Stephanie A. Malfatti (124718)
Joshua T. Aldrich (435194)
Carrie D. Nicora (230020)
Errol W. Robinson (328862)
Ljiljana Pasa-Tolic (154807)
Philip Hugenholtz (13833)
Blake A. Simmons (108789)
Steven W. Singer (162486)

July 2013

Normalized protein abundance within each of the three proteome fractions, by phylogenetic bins.</...

Unique amino acid distribution and average protein length.

Leslie Hatton (738144)
Gregory Warr (738145)

May 2015

A Cumulative distribution function of unique amino acid count occurrence in proteins. The analysi...

Comparison of (A) average protein length, the frequency of (B) PPP and of (C) PPG in the total proteome and in orthologous protein pools.

Ajeet Mandal (653939)
Swati Mandal (203916)
Myung Hee Park (176990)

November 2014

The orthologous protein pools were generated from each species: pool 1, those shared by all five ...

Distribution of cell cycle dependent proteins with changes in level and localization.

Shlomit Farkash-Amar (121750)
Eran Eden (121752)
Ariel Cohen (121753)
Naama Geva-Zatorsky (22491)
Lydia Cohen (121756)
Ron Milo (22493)
Alex Sigal (22494)
Tamar Danon (121758)
Uri Alon (15569)

November 2012

The number of proteins that were found to be cell cycle dependent in each of the tested categorie...

The statistics of the subcellular localizations and the numbers of interactions.

Motonori Ota (3064)
Hideki Gonja (2826827)
Ryotaro Koike (118247)
Satoshi Fukuchi (2976)

June 2016

A. The number of proteins (observations) in each subcellular localization and the average number ...

Annotation statistics for unigenes.

Zongying Zhang (391965)
Shenghui Jiang (775100)
Nan Wang (21935)
Min Li (12799)
Xiaohao Ji (391966)
Shasha Sun (775101)
Jingxuan Liu (278357)
Deyun Wang (517505)
Haifeng Xu (481507)
Sumin Qi (840628)
Shujing Wu (391970)
Zhangjun Fei (14143)
Shouqian Feng (391972)
Xuesen Chen (391973)

December 2015

Unigenes annotated as known proteins with E-value threshold 9E−6. Total numbers of uni...

Power-law distribution of protein lengths.

Leslie Hatton (738144)
Gregory Warr (738145)

May 2015

A The emergence of the protein length distribution with randomly increasing subsets of data from ...

Statistics of the proteins in the protein interaction network constructed based on the i2d database.

Shunyao Wu (692720)
Fengjing Shao (692721)
Jun Ji (82053)
Rencheng Sun (692722)
Rizhuang Dong (692723)
Yuanke Zhou (692724)
Shaojie Xu (692725)
Yi Sui (118031)
Jianlong Hu (692726)

February 2015

Statistics of the proteins in the protein interaction network constructed based on the i2d databa...

Statistics of proteins, PPIs, essential proteins, and proteins annotated by 11 labeled compartments in the global PIN of each species.

Abstract

Extracted data

Statistics of proteins, PPIs, essential proteins, and proteins annotated by 11 labeled compartments in the global PIN of each species.

Abstract

Extracted data

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