Enrichment of regulatory elements in 5C fragments. CTCF-A occupied 5C distal fragments enriched with active enhancer elements (P300, H3K4me1 and annotated enhancers, * represents hypergeometric enrichment p-valueâ<â0.01). (TIFF 8647Â kb
(A) Multiple sequence alignment of CTCF homologs in distant species. (B) Multiple sequence alignment...
CTCF&BORIS bound regions enclose at least two CTCF binding motifs. a The motifs identified by MEME f...
The primers used in the study for amplification of EMSA probes and for quantitative PCR. (DOCX 17Â k...
The binding affinities among CTCF-A, CTCF-B, CTCF-C differ significantly. (PDF 33Â kb
The distribution of different histone marks on three CTCF variations in GM12878. CTCF-A bindings are...
Distribution of the three CTCF motif variations in promoter, intergenic and intragenic regions. (TIF...
Enrichment of CTCF binding at the motifs with the 12th unmethylated site. The enrichment can be seen...
Comparison of DNA methylation levels in bound and unbound CTCF-A motifs (Control set). The control s...
DNA methylation distribution within regions [-50 bp, +50 bp] of the center of CTCF-A, CTCF-B and CTC...
Transcription factor binding site ChIP-seq Data. Filenames and URLs for the transcription factor bin...
Statistics of the CTCF motif variations discovery procedure. (A) The count of sequences in Seqm at e...
CTCF ChIP-seq data. Cell lines and statistics for the ChIP-seq data used in the study. (DOCX 55Â kb
Epigenetic profile of two classes of CTCF binding regions in BORIS-positive cells (K562). a Heatmaps...
CTCF&BORIS bound regions enclose at least two CTCF binding sites. a Genome browser view of CTCF and ...
Supporting figures. Figure S1. Hierarchical structures of the GM12878 TFs network. Figure S2. Percen...
(A) Multiple sequence alignment of CTCF homologs in distant species. (B) Multiple sequence alignment...
CTCF&BORIS bound regions enclose at least two CTCF binding motifs. a The motifs identified by MEME f...
The primers used in the study for amplification of EMSA probes and for quantitative PCR. (DOCX 17Â k...
The binding affinities among CTCF-A, CTCF-B, CTCF-C differ significantly. (PDF 33Â kb
The distribution of different histone marks on three CTCF variations in GM12878. CTCF-A bindings are...
Distribution of the three CTCF motif variations in promoter, intergenic and intragenic regions. (TIF...
Enrichment of CTCF binding at the motifs with the 12th unmethylated site. The enrichment can be seen...
Comparison of DNA methylation levels in bound and unbound CTCF-A motifs (Control set). The control s...
DNA methylation distribution within regions [-50 bp, +50 bp] of the center of CTCF-A, CTCF-B and CTC...
Transcription factor binding site ChIP-seq Data. Filenames and URLs for the transcription factor bin...
Statistics of the CTCF motif variations discovery procedure. (A) The count of sequences in Seqm at e...
CTCF ChIP-seq data. Cell lines and statistics for the ChIP-seq data used in the study. (DOCX 55Â kb
Epigenetic profile of two classes of CTCF binding regions in BORIS-positive cells (K562). a Heatmaps...
CTCF&BORIS bound regions enclose at least two CTCF binding sites. a Genome browser view of CTCF and ...
Supporting figures. Figure S1. Hierarchical structures of the GM12878 TFs network. Figure S2. Percen...
(A) Multiple sequence alignment of CTCF homologs in distant species. (B) Multiple sequence alignment...
CTCF&BORIS bound regions enclose at least two CTCF binding motifs. a The motifs identified by MEME f...
The primers used in the study for amplification of EMSA probes and for quantitative PCR. (DOCX 17Â k...
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