<p><sup>1</sup> Scope of individual energy terms. 1b indicates a per-residue or per-atom score (one-body), 2b indicates a two-body score, z indicates the score is dependent upon depth in the membrane bilayer, cd indicates the score depends on context (typically the number of surrounding residues), and ws is a score based on the whole structure.</p><p>Rosetta membrane energy terms used by RosettaMP.</p
Mean specific energy (SE) rates per nucleosome (μGy/h) and number of SSBs, DSBs (when considering fr...
<p><b>(A)</b> Rosetta’s “Talaris” energy function [<a href="http://www.plosone.org/article/info:doi/...
<p>Default reference weights are shown in grey diamonds. fa_atr and fa_rep represent Lennard-Jones t...
A basic function of Rosetta is calculating the energy or score of a biomolecule. Rosetta has a stand...
Over the past decade, the Rosetta biomolecular modeling suite has informed diverse biological questi...
<p>Each plot compares the performance of two different scoring functions for identifying the active ...
Over the past decade, the Rosetta biomolecular modeling suite has informed diverse biological questi...
<div><p>Membrane proteins are critical functional molecules in the human body, constituting more tha...
<p>The 10,000 conformations evaluated for our optimized RosettaDock scoring function are shown in bl...
While structures have been determined for many soluble proteins and an increasing number of membrane...
Thesis (Ph.D.)--University of Washington, 2014Protein structure prediction and design relies on conf...
<p>Left row lists the initial residue starting points. Top row header shows the mutation residue ide...
<p>Energy-vs-RMSD plots of the four benchmark cases for which NGK (red) finds alternative, lower-ene...
<p>The sampling efficiency for binding modes sampled within 2.0 Å of the experimental binding mode a...
For each test protein 200 structures were generated by Rosetta. The red ‘+’ sign indicates the avera...
Mean specific energy (SE) rates per nucleosome (μGy/h) and number of SSBs, DSBs (when considering fr...
<p><b>(A)</b> Rosetta’s “Talaris” energy function [<a href="http://www.plosone.org/article/info:doi/...
<p>Default reference weights are shown in grey diamonds. fa_atr and fa_rep represent Lennard-Jones t...
A basic function of Rosetta is calculating the energy or score of a biomolecule. Rosetta has a stand...
Over the past decade, the Rosetta biomolecular modeling suite has informed diverse biological questi...
<p>Each plot compares the performance of two different scoring functions for identifying the active ...
Over the past decade, the Rosetta biomolecular modeling suite has informed diverse biological questi...
<div><p>Membrane proteins are critical functional molecules in the human body, constituting more tha...
<p>The 10,000 conformations evaluated for our optimized RosettaDock scoring function are shown in bl...
While structures have been determined for many soluble proteins and an increasing number of membrane...
Thesis (Ph.D.)--University of Washington, 2014Protein structure prediction and design relies on conf...
<p>Left row lists the initial residue starting points. Top row header shows the mutation residue ide...
<p>Energy-vs-RMSD plots of the four benchmark cases for which NGK (red) finds alternative, lower-ene...
<p>The sampling efficiency for binding modes sampled within 2.0 Å of the experimental binding mode a...
For each test protein 200 structures were generated by Rosetta. The red ‘+’ sign indicates the avera...
Mean specific energy (SE) rates per nucleosome (μGy/h) and number of SSBs, DSBs (when considering fr...
<p><b>(A)</b> Rosetta’s “Talaris” energy function [<a href="http://www.plosone.org/article/info:doi/...
<p>Default reference weights are shown in grey diamonds. fa_atr and fa_rep represent Lennard-Jones t...